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GT15356

CSHL Arabidopsis genetrap mutant lines

Original: GT15356

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15356

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14520436 [Map]; Strand: w
      • AT5G36870.1 - [+] show detail - glucan synthase-like 9
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT15356 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    TTTGGTTGTC TCTGGGTTTG TCGCATTTGG ACATTAGCAA GTAACAAAAT 
    CAAGTGCTCT CTTTGATTTG AAACATTATC TTTCTGCCAT TTCAAGATCA 
    ATCATCAATC TCAACACAAT TTTAAAATAA ACAAAACAGT GAAAAAAAAT 
    AATTTAAACA TAAACCATGG TCATCTGTTT CAATACGTAC GGAATTAATA 
    ACTATTATTG ACAGAATTTT TTTATGATAA AGCACGGCGA AAGAAACCGG 
    AAAAAAAGAG TAATACAGTG GGAAAATGAG AAAAGAGTGA AGGGGAACAA 
    TTTAACTAAA TTCCGCCAGT GTATAGTCAT TTTGGTTATT TTGAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14520480 [Map]; Strand: w
      • AT5G36870.1 - [+] show detail - glucan synthase-like 9
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: GT15356 - 5-prime edge 
    TTTCCATCCT ACTTTCTCCC TGCACACAAA TGTATGTCTT GTGTTTTCTT 
    GCTCTGTGTC AAGTCCAATT TTTTTTTTTT TTTTGGAATG GTTTGCCCCA 
    AAAACCCCCC CAAATTTTTC CCCAAATTTT GGGAAAAACC CCCCCTGGAA 
    ACCGGGGGGG GAAAATTTTT GGGAAATTCC CAAAAAGGGG GGAAACCTGG 
    GGGCCCGGAA AACCCCCCTA AGAAAGGGTT TCCCTTTGGG TTTCCTTTCC 
    CCAAAAATTT GGCTTGGAAC CCTTCCGGAT TTTTCCCATT AAATTTTTTT 
    TTTTCCCCAC CTTGAAAGGG CCCCCAAAAA AAAACCAAAA AAGGGGGGCC 
    CCCCAAAAAA ACCCTTTTTT TCCGGGCCTT TTTTTTTAAA TGGGGGGAAA 
    ACCCCCACCC CTAAAATCCC CCCCCCC

AT5G36870.1

Model type
Protein coding
Short Description
glucan synthase-like 9
Curator Summary
encodes a gene similar to callose synthase
Computational Description
glucan synthase-like 9 (GSL09); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: shoot apex, petal, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR