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GT15192

CSHL Arabidopsis genetrap mutant lines

Original: GT15192

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15192

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21573872 [Map]; Strand: c
      • AT3G58260.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15192 - 5-prime edge 
    TGAGGAAGAG CTCAAAGATT TGAGGCAGAA GTGCTCAAGC CTTGAAGCTC 
    TTTTGAAGAA GGAGAAGACA GGTGTTTTGG CCGCCAAAGC TCCTTTCTTG 
    TTTTTTAATA

AT3G58260.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain (TAIR:AT3G58270.2); Has 1068 Blast hits to 958 proteins in 113 species: Archae - 2; Bacteria - 2; Metazoa - 237; Fungi - 51; Plants - 742; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR