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GT15184

CSHL Arabidopsis genetrap mutant lines

Original: GT15184

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15184

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6192324 [Map]; Strand: c
      • AT4G09840.1 - [+] show detail - unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; ...
        Distance: -660; Region: promoter
      • AT4G09840.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -660; Region: promoter
      • AT4G09850.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -188; Region: promoter
    Flanking Genome Sequence: GT15184 - 3-prime edge 
    TACAACGTAC ATTCTCTTAT ATAGAAATTA TGATAAACAT AAATGTAAAT 
    AATATATTTA AATTTAGATA TAATGTTAAA CTTCCAAAAA TTCCAATATT 
    AACATTTATT TTATAGAATA ATATCTTCTT GCCATATCTC GATCTT

AT4G09840.1

Model type
Protein coding
Computational Description
unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 4; Plants - 9; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G09840.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, leaf whorl, sepal, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 4; Plants - 9; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G09850.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR