Home
Mutant Lines
GT15066

GT15066

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT15066

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 21735357 [Map]; Strand: w
- AT5G53500.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -6057; Region: intergenic
- AT5G53510.1 - [+] show detail - oligopeptide transporter 9
  Distance: -3492; Region: intergenic

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACTTGA ACATTCGACC 
AAACATCTCA TTCATTAAAA ACCTTTTCAA ATAGATAACA AAACTAGAAA 
GAAAGCATCA TATGCTTATC ATCAAAACCT TTAATCATTA AAATTTGCGT 
AATTAAAAGA AATCTTTAAA CTTCTGCTTA TCAGAATTTT TTTAAATGAA 
GAATCACTTA CATATGTCTT TTATTAGATA TATGTCTTTT AAATATGTCT 
TTCTCAATCC TATAATACAA TTTTTCAAAA TTTAGATGCC TATAATGTAA 
GTAATAACTA TATCTCCCCC ATATATATAT ATATATACAT ATGTAAATAA 
TATAAGATCT GATATACTAC ACATATATGA GTGGGGGCAG ACCCACAAAC 
ACTGTAGATG TGTCTTTATG AGGTCAGCAT TTGTATGAAA GATAGAGAGA 
TAGGTTTCTC TGTATTTGTG TCTCCATTCA AAATAAGACA CTAGAGTTTA 
CAAATAGATA GATATCCAAA TTTAGAACCA TAAAAAATAT CGTGAAAGTG 
GGATTTTAG

3 prime edge [+] show sequence

Chromosome: 5; Position: 21735370 [Map]; Strand: w
- AT5G53500.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -6070; Region: intergenic
- AT5G53510.1 - [+] show detail - oligopeptide transporter 9
  Distance: -3479; Region: intergenic

AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAACT 
TGAACATTCG ACCAAACATC TCATTCATTA AAAACCTTTT CAAATAGATA 
ACAAAACTAG AAAGAAAGCA TCATATGCTT ATCATCAAAA CCTTTAATCA 
TTAAAATTTG CGTAATTAAA AGAAATCTTT AAACTTCTGC TTATCAGAAT 
TTTTTTAAAT GAAGAATCAC TTACATATGT CTTTTATTAG ATATATGTCT 
TTTAAATATG TCTTTCTCAA TCCTATAATA CAATTTTTCA AAATTTAGAT 
GCCTATAATG TAAGTAATAA CTATATCTCC CCCATATATA TATATATATA 
CATGTGTAAA TAATATAAGA TCTGATATAC CACACATATA TGAGGGGTGG 
CAGACCCACA AACACTGGTG ATGTGTCTTT ATGAGGTCAG CATTTGTATG 
AAAGATAGAG AGATAGGTTT CTCTGTATT

AT5G53500.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G24320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G53510.1

Model type: Protein coding
Short Description: oligopeptide transporter 9
Curator Summary: oligopeptide transporter
Computational Description: oligopeptide transporter 9 (OPT9); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 1 (TAIR:AT4G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR