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GT15062

CSHL Arabidopsis genetrap mutant lines

Original: GT15062

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15062

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17585295 [Map]; Strand: w
      • AT4G37400.1 - [+] show detail - cytochrome P450, family 81, subfamily F, polypeptide 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15062 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATG 
    TAAAACTAAT CTTAAATCAA ATCAATAGAT GCCCCTAAAT GGAATAAAAG 
    TAAATAGACC TATTCGGTTT TACATTTCAT AGCTGTACCT AGCTAACTAC 
    CTAATATAAA AAATAATTAA AGATATATTT TGCGAAAAAC TTCAAATCCA 
    AATTATAAAA CTTTTAAAAC CCAACCGTTT TTTTTGTGAA CCACAAGATC 
    TGAAGTTGAC CAAAAAAACA GAAGATCTGA AAACCAAAAA AAAAACTGAA 
    GGACCCTAAC AAATTGAACA GCCCTAAATC CCTTATATAT CCTACCAACC 
    CTAATTTGCA AAACCTCGAA TATCTAACCA GCATTAGGCC TTTGAAAGGG 
    ACGCCGGGGA AAAACTCGGG TCCATTTGGT TGCAAAGAGA GCAAAGGATA 
    ACCCAAAGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17585353 [Map]; Strand: w
      • AT4G37400.1 - [+] show detail - cytochrome P450, family 81, subfamily F, polypeptide 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15062 - 5-prime edge 
    CTTTCTCCCT GGTTTTACGA ATTGGTGGTA TCTATAGACC ACACCATACC 
    GGAATTGGTC TTGAAAAGTT ATTTCTTAGG ATTTGGGACC CATGCGGCTG 
    TCTATAGTAC GGACAATAAT TTATTCTTAA AAAGTAGAAA CAATTCTGAC 
    TATTCCTAGT TTCCTAATTC CTACTATGTA GAAACTATTC TGACCCATTT 
    TTTCAAAATC GATATATCAA TATGGTTTCA CATTTATACG GTTCTAGTTT 
    AACAAGATTT GTTAATTATG CGTAAAACAG GGCATGATGA TCGCCGGAAC 
    AGACACTTCC GCTGTGACGC TGGAGTGGGC GATGTCGAGC TTGCTAAATC 
    ATCCCGAGGC TTTGGAAAAA GCAAAACTAG AGATTGACGA GAAAATCGGA 
    CAAGAACGTT TGATCGATGA ACCAGACATC GCACACTTGC CTTACCTTCA 
    AAAC

AT4G37400.1

Model type
Protein coding
Short Description
cytochrome P450, family 81, subfamily F, polypeptide 3
Curator Summary
member of CYP81F
Computational Description
"cytochrome P450, family 81, subfamily F, polypeptide 3" (CYP81F3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, leaf whorl, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 4 (TAIR:AT4G37410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR