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GT15052

CSHL Arabidopsis genetrap mutant lines

Original: GT15052

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15052

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12609902 [Map]; Strand: w
      • AT2G29380.1 - [+] show detail - highly ABA-induced PP2C gene 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15052 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAGTATG 
    AGGCAGTCAT CGTCTCTCCT GTCCGTTATG GTTACCTCCG GCTCGCAACT 
    CACGTAAGGT TTCAAATAGT TGTCTCCTAT TGCTCGTGAC ATTGCTAAGA 
    CTCCGAGAAC TCTTGGACAG TCCCAATATA TGACTCGTCC ACCAGCTCCT 
    TCGATTCGAT CCAATTCGTC TGGCCGATCA GGCTGTGTTT CATTACAAAG 
    AACACAATCT CCAAGTTAAT CCACAAATCC AATCATTGCT TAAATGAAAC 
    TGAACATGTT TTGAACGGAA CTGACCTTGT GATCGGTTGA TAAAGGGACT 
    GGTTTCCCAT TGCGGCAGAG AACTGCTCTG GAATCGCCAC AATTGGCGAC 
    AACGATCTTA TCTGGCGTAA TGACTGAGAC AACAGCGGTT GATCCGACGG 
    AATCACAAGC CGGTGTTTGT AGATCACACT TGCAATTTGC AGTCACGACG 
    GAATCACCCC ACGATACAAC TTCCTTATCC ATGCGTGTGA AGCTACGCTC 
    CATCGTCGTT TTCCATTCTT CTTCATCTTC CATATCTGAA CTTAGTTCTT 
    CTTGCACCAG CTTGTGAAGC CTCTCTCTAC ACCTTGCTGC AACCTAAGGA 
    AAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12609905 [Map]; Strand: w
      • AT2G29380.1 - [+] show detail - highly ABA-induced PP2C gene 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15052 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAAGT 
    ATGAGGCAGT CATCGTCTCT CCTGTCCGTT ATGGTTACCT CCGGCTCGCA 
    ACTCAAGTAA GGTTTCAAAT AGTTGTCTCC TATTGCTCGT GACATTGCTA 
    AGACTCCGAG AACTCTTGGA CAGTCCCAAT ATATGACTCG TCCACCAGCT 
    CCTTCGATTC GATCCAATTC GTCTGGCCGA TCAGGCTGTG TTTCATTACA 
    AAGAACACAA TCTCCAAGTT AATCCACAAA TCCAATCATT GCTTAAATGA 
    AACTGAACAT GTTTTGAACG GAACTGACCT TGTGATCGGT TGATAAAGGG 
    ACTGGTTTCC CATTGCGGCA GAGAACTGCT CTGGAATCGC CACAATTGGC 
    GACAACGATC TTATCTGGCG TAATGACTGA GACAACAGCG GTTGATCCGA 
    CGGAATCACA AGCCGGTGTT TGTAGATCAC ACTTGCAATT TGCAGTCACG 
    ACGGAATCAC CCCACGATAC AACTTCCTTA TCCATGCGTG TGAAGCTACG 
    CTCCATCGTC GTTTTCCATT CTTCTTCATC TTCCATATCT GAACTTAGTT 
    CTTCTTGCAC CAGCTTGTGA AGCCTCTCTC TACACCTTGC TGCAACCTAA 
    GGAAAAAAAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12609959 [Map]; Strand: w
      • AT2G29380.1 - [+] show detail - highly ABA-induced PP2C gene 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15052 - 5-prime edge 
    TCCTACTTTC TCCCTGCTCT ACTAGCTAGT GATGGTTTAT GGGATGTTGT 
    GTCAAACGAG ACCGCCTGCT CTGTAGCGCG TATGTGTCTC CGTGGTGGTG 
    GGAGAAGACA AGATAATGAG GATCCGGCGA TTTCGGACAA GGCTTGTACG 
    GAAGCGTCAG TATTGCTAAC AAAGCTGGCG TTGGCAAGGA ACAGTAGTGA 
    CAACGTCAGT GTCGTTGTGA TTGATCTCAG AAGATAAGGA CACGTAAGTG 
    GACACTAGTC GAAGAGGAAG ACAATTTTGC TTTAACTTTC TATATCAGTT 
    TTGCTTTTTG GTTATTCTTG GAATACGTTG GTTGTATACA AAATTAACCC 
    GATTTTATGG AAACCCCGAA AAAGGGTTAA TTAATAGAAA TGATAAGAAT 
    TATTCTTGTC AACCCTAATC CTGTTTCGTG TATGCTTATA ATCTTAAATC 
    AAATCAAATT AAGAAGGTCG ACATGTAAAA GCATTTTGCT TTAAAAAAGA 
    TTGTCAGACT ATACTATACC TTTTACTTTT AGGCATTAAG ATACTTTAAG 
    AGGTACTTAG TCTCTGCCGC TAGGCAAAGA CATGAGAGTA GATCATAGGT 
    TCTAAATGCA ATTATGAGTA TTAGCAGTGT CTAAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12609964 [Map]; Strand: w
      • AT2G29380.1 - [+] show detail - highly ABA-induced PP2C gene 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15052 - 5-prime edge 
    CTTTCTCCCT GCTCTACTAG CTAGTGATGG TTTATGGGAT GTTGTGTCAA 
    ACGAGACCGC CTGCTCTGTA GCGCGTATGT GTCTCCGTGG TGGTGGGAGA 
    AGACAAGATA ATGAGGATCC GGCGATTTCG GACAAGGCTT GTACGGAAGC 
    GTCAGTATTG CTAACAAAGC TGGCGTTGGC AAGGAACAGT AGTGACAACG 
    TCAGTGTCGT TGTGATTGAT CTCAGAAGAT AAGGACACGT AAGTGGACAC 
    TAGTCGAAGA GGAAGACAAT TTTGCTTTAA CTTTCTATAT CAGTTTTGCT 
    TTTTGGTTAT TCTTGGAATA CGTTGGTTGT ATACAAAATT AACCCGATTT 
    TATGGAAACC CCGAAAAAGG GTTAATTAAT AGAAATGATA AGAATTATTC 
    TTGTCAACCC TAATCCTGTT TCGTGTATGC TTATAATCTT AAATCAAATC 
    AAATTAAGAA GGTCGACATG TAAAAGCATT TTGCTTTAAA AAAGATTGTC 
    AGACTATACT ATACCTTTTA CTTTTAGGCA TTAAGATACT TTAAGAGGTA 
    CTTAGTCTCT GCCGCTAGGC AAAGACATGA GAGTAGATCA TAGGTTCTAA 
    ATGCAATTAT GAGTATTAGC AGTGTCTAAA GAATAAGAAA AACAGTAAGC 
    AGTAGTAACA ACCAGTCCAA TAGAAACGAG GTCACGTATA AATTTCAACA 
    TCGAATCGAC TTCAGACTAG CAGCTT

AT2G29380.1

Model type
Protein coding
Short Description
highly ABA-induced PP2C gene 3
Computational Description
highly ABA-induced PP2C gene 3 (HAI3); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6960 Blast hits to 6933 proteins in 604 species: Archae - 4; Bacteria - 618; Metazoa - 1585; Fungi - 779; Plants - 2700; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink).
Link
InterPro Scan - TAIR