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GT15051

CSHL Arabidopsis genetrap mutant lines

Original: GT15051

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15051

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15511913 [Map]; Strand: c
      • AT2G36930.1 - [+] show detail - zinc finger (C2H2 type) family protein
        Distance: -399; Region: promoter
      • AT2G36940.1 - [+] show detail - unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bac...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15051 - 5-prime edge 
    TACTTTCTCC CTGCGTATTG GTGACAAAAA AAATTATAGA GAGAAGAAAC 
    AAGCTTCAAA CCCTCCCCAA GACAACAAAA CCATCATTGT AGGGAGCATT 
    AAGAGTATGC AACGCAAAGA GGCCTTTCAT TCCCTTGTTC TAAACTTCTA 
    AGAATTTATT GGTTTCTTGT TATACTAATA AATTAATGGA ACCCTAAAAA 
    CAAGGTTATG AGATTTATCA GTAAACCTAC GCTTCTGTCA CTAATTCGGT 
    CCAAGTACAT TGCTAGAACT CTGTGACTTA TCTTACAATG CTATTTCAGA 
    ATAATTTCAG ACTAGATCTT AATTGGTTCC GTATGTATTA CTGATTTCCA 
    AATCATTAAT TATTAATGGG CCTATCTAAG CCTGTTTAAT AAATGGGCCT 
    TGCGTCAAAG TCTCCATCAC TGAAACCGCC CTTTTTAGGT TAATCAATAC 
    TTTATAACCG AAACTGAAAT TTTTTCTAGG GTTTCCTCTT CCGCATTCGT 
    CGTCT

AT2G36930.1

Model type
Protein coding
Short Description
zinc finger (C2H2 type) family protein
Computational Description
zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); Has 726 Blast hits to 418 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 301; Fungi - 225; Plants - 112; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36940.1

Model type
Protein coding
Computational Description
unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR