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GT15002

CSHL Arabidopsis genetrap mutant lines

Original: GT15002

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15002

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 508640 [Map]; Strand: c
      • AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15002 - 5-prime edge 
    ATCCTACTTT CTGCCTGGGT TGAACCATTT GAGCAGCTTT CTGTAGAAGG 
    GCAGTGGTTG ACATGTGAGG TGCTGAATTT GGACTTTGCA TTGATGAGCT 
    AAAGAGTGAA GGGACTGATC CTGAGCTAAT TCTATCTGCC GAGCTCATCA 
    GATTGTTAGG GAAGAGACCA GTGCTTCCTT CTCCTCCTCC TCCAACAGCA 
    TTTTCGCCAT CATAATGGTT TGATATCATA AGATTACCAG AAGAAACAGC 
    AGCAGCGGCG GCAGCATTAG GGTTACTTGT GGCAGAAGTA ACTCCGTTGT 
    TTCCGGAGAG GAAGCTGAGA TTGAAGACAT TGGAGGGAGC AGAATTATGG 
    TTATCATGTG AGAACTGCAT CAGATTCTGT TGAAAACTCA TTGGTGATTG 
    CTTGATGTTA TTGTTCCCAG CCAAAAACCC TTGTTGATGA TGATGATGAT 
    GATGATGATG ATCTTGTTGA TCATGAAAGC TAGGGTTTTG CTCTTGCATG 
    AAGT

AT2G02070.1

Model type
Protein coding
Short Description
indeterminate(ID)-domain 5
Computational Description
indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link
InterPro Scan - TAIR