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Mutant Lines
GT14969

GT14969

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT14969

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 17137473 [Map]; Strand: w
- AT4G36220.1 - [+] show detail - ferulic acid 5-hydroxylase 1
  Distance: 0; Region: exon3 (3UTR)

TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGTGTATAC 
ACGTGTGTTC TGATGAAAAC AGATTTGGCT CTTTGTTTGC CCTTTTTTTT 
TTTCCTTAAG GGGGGATTTC CCTGGAGGGA AGGGAACCGG AAAAAAAAAA 
ATTTTTTCCA AAAGGAATTT AACCGGGTGC AAAAAACCGT CTTGGGAGGA 
AACCTCCCCC TAAAAAAAAA AAAAAAATTT TTTTTGGGAT TTTCCCCCCT 
TTTCTTTTTC CCGGGGGGGG GGGGCCCCCT GGGGCCAAAA GGGGGGGGAA 
ATCCCCGGGT TACCCCAAAA CCAAAATAAA AGTTTAATTT TTCCCCCCCC 
CCAAAAGGGG CCCAAAAAAA ACCCCCCGGG TTTTTTAAAA AAAAACCCCG 
GGGGTTTTAA AAGTTTTTTT TCCGGGTCCG GGGGACCATT TTCCTTTTTT 
TTTTTTGGCA AAAAAAGGGT TTTTCCCCAA TTGGGGGTTT GGGGAAAAAC 
CCCCAAAAAA CCGGGGTTCT TCCCCAAAAA AAAACGGGGG GGGTTTTGAA 
AAT

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 17137565 [Map]; Strand: w
  - AT4G36220.1 - [+] show detail - ferulic acid 5-hydroxylase 1
    Distance: 0; Region: exon3 (3UTR)
Flanking Genome Sequence: GT14969 - 5-prime edge
```
ATGACATCCA CAAATCCTCG ATGATGGCAA CTTCAAACTT TTCAGTTTTC 
ACCATACCAA ACCCCCTGCC ACGTGACTCG AACCATAAAC TTAAAGAGCA 
CAGATGAGGC GCGTGGTTGG CACGGCGAAA AGCCGCGTGG CTTTAGGAGC 
CGTGAGACCA AACACATCAT TCTCCTTCAC TCGA
```

AT4G36220.1

Model type: Protein coding
Short Description: ferulic acid 5-hydroxylase 1
Curator Summary: encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.
Computational Description: ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink).
Link: InterPro Scan - TAIR