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GT14960

CSHL Arabidopsis genetrap mutant lines

Original: GT14960

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14960

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18586032 [Map]; Strand: c
      • AT5G45810.1 - [+] show detail - CBL-interacting protein kinase 19
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14960 - 3-prime edge
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    TGAAGATGAT GGTGAAGGAT CTAGGTTTGT ATCTGGTGCT CCTGTTGGTC
    AGATCATTTC TAAGTTGGAG GAAATCGCGA GAATTGTGAG CTTTACGGTG
    CGAAAGAAGG ATTGTAAAGT GAGTCTTGAA GGTTCAAGAG AAGGAAGTAT
    GAAAGGTCCA TTGTCAATTG CTGCTGAGAT ATTTGAACTG ACACCAGCTT
    TGGTTGTTGT TGAAGTGAAG AAGAAAGGAG GTGATAAAAT GGAGTATGAT
    GAGTTTTGTA ATAAGGAGTT GAAACCTAAG TTGCAGAATT TGTCTTCCGA
    AAATGGCCAA CGGGTTTCTG GTTCGCGTTC TTTGCCATCG TTTTTACTTT
    CTGATACTGA TTAGGAAGAT GAAAAATGAA GTTTTTGTTT CTGTTTTATT
    AGTTTTGTGA CTCATATGTG GGGTTAACGA CTTGTAATGT TCTTGTTCTT
    TGATGGTGTG TGAGAGACAT TAGAATTTAG ACCTAAAGAG GGTGGTGAGA
    TATGAATCAT TGATGTGTAG AAAACACAGA TGGAATAAAC AAGTTTCTTT
    ATGAGTTTGG TTCTTTTTTT TCTTTCTTTT TCCTTCTTTT GAATTTTAAT
    TCTGTTAGTT TGAAATATGA CAGAAATTCA CTTAGAACAA TATTGTGTAA
    TTTCTGTTGG AAATTTTGTC TACTAACGTC AATTAATATG ACGGTTTATG
    ATATATAATT GAACATGTAG AGTTTACAAA AACAAAATCT TGAGAAGAAA
    GTTTAGCATT ATAATCCAAG CCACACCATT AGCTAATCCA A
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18585976 [Map]; Strand: c
      • AT5G45810.1 - [+] show detail - CBL-interacting protein kinase 19
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14960 - 5-prime edge
    CCTACTTTCT CTCTGCTTCA ACAACCCGAA AGATAAAACC TGGCGAAAAC 
    GAAATGAGAT CGAAAGCATT CAAACTCGCC GGTCTAGGCA TCGAACCACC
    TCTTCTCCTC CCATCAAAAG ACTCGAAGTC TTCCGGTTCA GAAACAGTAG
    AAGACCTCCC CGAAACCGAT TCAATCGATT CGATCTCATC ATCATCAGCA
    ACGTTACAAA GCTGATGATC ATCTTCAACA TAAAACTTAA TATGCTTAAA
    ACCTTTCTTG AACCAACTAG TCTCCATAAT ATCCGGCATT GTAAACCGTC
    TCTCCGGTTT AGTCTCCAAC ATTCGAATCA ATAACCGGTT AATCTCAACC
    GGAAACCATC TCGGACACCT AAAATCTCCT CTGTAAATCT TCTTATACAT
    AGCCATAACA TTCCGATCAT GAAAAGGAAG AAACCCTGCC ATTAACACAA
    ACAAGATCAC TCCACAAGAC CAAATATCGA CTTTAGCTCC ATCGTAGCCT
    TTCCGAGCAA GAACCTCCGG TGCCACGTAA GCAGGGGTCC CACAAAAAGT
    ATGAAATAAC CCATCTTGTC GAATCTGATC AGAAACAGCA CTAAGACCAA
    AATCAGAGAC TTTTAGGTTT CCATTTTC

AT5G45810.1

Model type
Protein coding
Short Description
CBL-interacting protein kinase 19
Curator Summary
Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.5), which has also been reported as a member of the CBL-interacting protein kinases (CIPK19).
Computational Description
CBL-interacting protein kinase 19 (CIPK19); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 12 (TAIR:AT4G18700.1); Has 131743 Blast hits to 129755 proteins in 4578 species: Archae - 210; Bacteria - 15711; Metazoa - 47953; Fungi - 13173; Plants - 32300; Viruses - 528; Other Eukaryotes - 21868 (source: NCBI BLink).
Link
InterPro Scan - TAIR