Home
Mutant Lines
GT14958

GT14958

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT14958

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 12335704 [Map]; Strand: c
- AT2G28755.1 - [+] show detail - UDP-D-glucuronate carboxy-lyase-related
  Distance: -1245; Region: intergenic
- AT2G28760.1 - [+] show detail - UDP-XYL synthase 6
  Distance: 484; Region: intergenic

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT 
TTTACCTGAC TAGAAAGAAA TAACACAAAA GAGTATTCCG AAAAACTGTG 
TGCTACAGCG GATTAGTTGA ATGTATCTTC GATCAACTAG TATATAGTCT 
ATAAACAAAA TTAGTAGTTT CTACCTATCA CGTTTTAAGA CCAATCGCAT 
ATTAGGAGAA AGAGAGGCTT CAACCTTGAG CTTAAGAAGA AGAGAGACTC 
TAGTTTGTTG GACTGTTCTC TTAACAATGT CTCTTCTTGG TTCATTCTTT 
AAACCAGTGG TGTGAGAGAT AATGAGGTAG AGTACAAACT GACATAAACT 
AGATTGTTAA ATCAGAAACT CTATAAACCA AAAAACTCGA AAATCCGGAT 
TGACACACTA TTAGTTTTTA TTCGTTTGAT GTTTCAAATG AATTCGATCA 
TTTGGGTACA ATACAAGGAA AACAATTTGG ACTTTTCCAC ATTTCACAAG 
ATCAGTGAAA ATGAAACGAC TCATTTTGTC GACTACTAAG CTTAAAACAT 
CTCACTGATT ACATTCATAA TAAAATTCAA GTAGTAACGT AACATCACTT 
CCCTAAAATG TTCCTCGTTA GGACGCTTAT TTCCTACAAA CTCAAAATGC 
AAAGAGAAAG ATTAAAAGAC ATGCTCCACA TGTTCCGGGG ATAAGTGTGC 
ACTTGCTTCG ACTTGGAACC CCGATTTCAA ACAAACAAAC AAAATGATAA 
G

5 prime edge [+] show sequence

Chromosome: 2; Position: 12335647 [Map]; Strand: c
- AT2G28755.1 - [+] show detail - UDP-D-glucuronate carboxy-lyase-related
  Distance: -1188; Region: intergenic
- AT2G28760.1 - [+] show detail - UDP-XYL synthase 6
  Distance: 541; Region: intergenic

CTTTCTCCCT GGGTAAAAGA AGATCCAATA CGTACAACTA AACAATTCAA 
TATCTGACCA AATAAACCTA CAAAATACCA TTATTTTTAA TATATTAAAA 
TTTATGCTTG TCTAAGTTGA CATGGTTCCA AAAAAGCCAT TGGAGAAGGG 
CAGAGTTTTG AGATTCATGA AGGAATTTCT TGGCTGCAAG TTTTTTTCAA 
GATTTGTGCG TCTAGGTACG GTATGAAGCT AATACCAAGA TTGTGCTTAT 
AATTTTGCAT GAGAAAGAAA TCCTAAAACA GAAATTCTGA GTTCATTCTT 
CAAGATTTGT GCTTCTTTGT TTTGATTCCA ATGTGGATAA GTATTCAACT 
TAATGAGAAT TTTTATGACT AATACCTATG ATATTTGTAT GAAAATTGAA 
TCAAGAGCAC ATGTTTTATG AGTTTTTCGA GATCAATGTG ATCCAAGTTA 
TACCTCAGCA AGAACAACAC CTCCCAATTC ACTATCAGTG GAGTCTTTGA 
GTTAAAAAAA AAAAAAAAAA ATTGGGTTTT TAAAAATTTT GGTCTTAAAA 
AAAATTTTAA CCCCCCCCCC CTCCTGAAAT GGTAAAAACC CCCAATTTTT 
TCCAAAGGTC CAAACCCAAT TAAAGGGGGA ATTGGTCCAA AAACCCCCCG 
GAACCCCACG GGTAATTTCC AGGGGGAAAA CCGGGTTCAA ACCCC

AT2G28755.1

Model type: Protein coding
Short Description: UDP-D-glucuronate carboxy-lyase-related
Computational Description: UDP-D-glucuronate carboxy-lyase-related; BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 6 (TAIR:AT2G28760.3); Has 831 Blast hits to 831 proteins in 250 species: Archae - 2; Bacteria - 368; Metazoa - 79; Fungi - 6; Plants - 222; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G28760.1

Model type: Protein coding
Short Description: UDP-XYL synthase 6
Computational Description: UDP-XYL synthase 6 (UXS6); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 45408 Blast hits to 45356 proteins in 3037 species: Archae - 861; Bacteria - 26677; Metazoa - 782; Fungi - 385; Plants - 1435; Viruses - 88; Other Eukaryotes - 15180 (source: NCBI BLink).
Link: InterPro Scan - TAIR