1. Home
  2. Mutant Lines
  3. GT14519

GT14519

CSHL Arabidopsis genetrap mutant lines

Original: GT14519

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14519

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23152963 [Map]; Strand: c
      • AT3G62600.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14519 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TACATCAAAC ACCAATACGT CAATTCTCAA AACTAAAAAC GGGTGAGTTA 
    ACAAAGAGAG CAGAATCACA CAAGTTGCAA AACGAAAATA CCATTGTTGA 
    TCTCAGCGAA TTTGCGAGTC GCTTCCTCAT TTCCTTGATT CTTATCGGGA 
    TGATACTTCA AAGCTAGTTT CCTATAAGCT CTCTTGATCT GTTCATCAGA 
    TGCACCTTTC GGGACTTGCA ACACATCGTA GTAACTCTTC CTAAATCCAC 
    AACACAGATT TTCTAAGCAT TCACATTTTC CACACATTTC TGAAGGAATC 
    GAAAGATGTT CTTACCCGGC AAGGACGCAG ATGGCGTAGG AAAGAGCGAA 
    CAGTACGATA CACAGCTCCG ACCACCGAAT CGCCATGGAA ACGGAAATCG 
    GATCTCTCCC AAGGATTACT CCAACCTGAG ATTCGTTTCG ATTTTAACAA 
    TGAAACCTCA CAGAATGAAC AAGAACGAAG ATCTTCTTCG CTGATTTTTA 
    TGATTGGAAA ACTCGAATCA CTCTCTCTAC TTGTTTTCGT GGAAACGATT 
    CCAAAACTCG AGCCTCGTGG TCGGGTTACG TGTACACTGC AATGCTTAAC 
    CAATCAGGAT TAAGTCTCTG ACGATCGTAA CCAATAAATA TTAGCCACGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13254224 [Map]; Strand: c
      • AT4G26150.1 - [+] show detail - cytokinin-responsive gata factor 1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14519 - 5-prime edge 
    TTCCTTTGCC TTATTCCACA AGCGTTACAA AGAGACTGTA ATAACAAAAC 
    AAGAAAAAAC ATGATAATTT AGTTAATTAT CTTGTAACAT GAATTTTAGA 
    AGATCTCAAA GATTAATCTG TTTAAACCAA CTTATAATGC TACATGAAAT 
    TGTTTTTACC AGTTAGAGAT TTGTAGATTT ACTTTTCATT TGCTATTAAT 
    TAGTACTATA AAAAGACATA TTCTTCGTGA GCTTCTAATA ATCAATATGA 
    GTATATATGA CATTACTTAG GCATCTACTT TTAACATTAA AACCAAAACA 
    AAGCTTACGC ATATATGTGT AATTAACAGA CGTGTGATTA ATACCTTGGG 
    ACCTCTCGGA CCACTTCTCC AAAGAGGAGT CTTGGTTGTG TTACAATCGG 
    AGCAAATCCT AATCACGCAA TCGTTGTTAT AACCATTCTG TCTTTCCGAA 
    TTGCTTAGGT TTGAGGATTG GTCGTTATTA GTGTGTTGTT TGCTGCTGTC 
    GCTGGTGGTA ATAATCGCCT TTTTCTTCTT

AT3G62600.1

Model type
Protein coding
Short Description
DNAJ heat shock family protein
Curator Summary
J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.
Computational Description
ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G26150.1

Model type
Protein coding
Short Description
cytokinin-responsive gata factor 1
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
cytokinin-responsive gata factor 1 (CGA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT5G56860.1); Has 1630 Blast hits to 1587 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 659; Plants - 751; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR