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GT14506

CSHL Arabidopsis genetrap mutant lines

Original: GT14506

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14506

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21215356 [Map]; Strand: w
      • AT1G56612.3 - [+] show detail - other RNA
        Distance: -412; Region: promoter
      • AT1G56612.2 - [+] show detail - other RNA
        Distance: 0; Region: exon1 (NonCoding)
      • AT1G56612.1 - [+] show detail - other RNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT14506 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TATTTCAATT CCCGATCAAA TTTACAAGGG AATCCGTGGT AGCTCTTTCA 
    ATTCACCTGG CTCCGCCGCT CCTCTGGTAA TTTCTCCGAG GTTAGCTCGT 
    CTGCTACAAT GAAATCGGCA ATCGTCTGGG GAATCAGCAG CTCCTGCGAC 
    GGCCACATAT TCGCCGTACA TCCGTGGATA AGGAAGAAGA GATTCGAACC 
    TGGATAATCT ACGAAGCGAA CAAAGACAGA CAGAACTTGG AGCGTCAAAT 
    CTGTGAGTGG AATTACAGGA TAGGACCAAC TAAGTCATAA CATGTATATA 
    GTCTGTTGTT ACACAATTCA CAGTTTTGAT TTTGGGTTTA GTTAAATGTC 
    TGGCTTGGCT AATCATGTGG TTGGTTCTCA AAGACTGACA AGGAACTTCG 
    ATTGTATATA CACTGGTTTA AGATGCTAGG CAGTTTTTCA TCAACTGTTA 
    GATTTCGATT TCTCTATGTA GCACTAATAT ACATTTTGGT AGTCTTAGCT 
    GTCTGTCTTT GATCATTTCA CCTGACTAGT ATGATGATTT ACCTTGAATA 
    TTTGTGACCT TGTTGTAAGT CCTATCCAGC AAGGATCTCA TTTGATGTTT 
    CGAAACTCCA GGCGACCCTC GAGCTATGCT CTTCACAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21393732 [Map]; Strand: c
      • AT3G57740.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G57750.2 - [+] show detail - Protein kinase superfamily protein
        Distance: -247; Region: promoter
      • AT3G57750.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -292; Region: promoter
    Flanking Genome Sequence: GT14506 - 5-prime edge 
    CCTACTTTAT CCCTGCCTCT TCATAAAATG CACACAATAA ACTTTGTAAA 
    AGTTTCCTCT ATGTCCATCT CTCAATCCTT TTTAGTTCCT TGGCAACTTC 
    CATCATCTTT GGAACATCAC CTCTATGACC AGTACATCTG AGTGAGAGCA 
    TAAGGACTGC TTTCATTCGT CGTATCTTGT GTTCTTCGGT TTCATCATCA 
    CCCATACTTT CCAACATTTT TGGATCCAAC ATGTCAAAGA TTCTTCCCTC 
    TTCCACAAAT TTGGATATCC TATCTGAAAT CCTTAGATTC ATTACATTTT 
    GTTTGTCTTC AAACTCTTCA AATAGACTCT CATCTTCACT GCAACAACAA 
    TCAACCACTC CGTACGTTCT TGTGAAAAAG TTTTGCAACA ACACTCCAAA 
    GCTAAAAACA TCGGTATACT CGGTGATCAA TCCGGTCGCC GCGTAGTTAT 
    ACTCTAGATA ATCTAATGTT CCTTCTACTC TATCAGCATG AACCTTAACA 
    AATGTCTCTC CTTCTGGAAT TGCGATACAA AGACAAAAGT CACTTAGCTT 
    TGCTGTCCCA TTGGAATCCA CGAAAATGTT AAAAGGTTGT ATATCCGTAT 
    GAATCATAGT TCTTGACAAC GCGGTGTGAA GGTAAGAAAC CGCAATCGCA 
    ATCTCTTTGG CAATCTTTAT TCGCATTCTC CACGGTAACA ACATTTCCGG 
    GTTTGGAGTA TTGAATGGTA TACGTTCTGC ATACTCGCAA ACTAAGACCG 
    GATGCTCAAA CTCAAGACAA CATCCTAACA ATTTGAGGAA ATTCTTGTGA 
    CCACTAACCA TTGATGAGAC CGCTATGTCA CG

AT1G56612.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G56610
Link
InterPro Scan - TAIR

AT1G56612.2

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G56610
Link
InterPro Scan - TAIR

AT1G56612.3

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G56610
Link
InterPro Scan - TAIR

AT3G57740.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57750.2); Has 31135 Blast hits to 30839 proteins in 1583 species: Archae - 4; Bacteria - 2835; Metazoa - 4267; Fungi - 840; Plants - 21255; Viruses - 28; Other Eukaryotes - 1906 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57750.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 51261 Blast hits to 50836 proteins in 2124 species: Archae - 20; Bacteria - 5135; Metazoa - 13711; Fungi - 2551; Plants - 24631; Viruses - 129; Other Eukaryotes - 5084 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57750.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR