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GT14503

CSHL Arabidopsis genetrap mutant lines

Original: GT14503

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14503

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23152915 [Map]; Strand: c
      • AT3G62600.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14503 - 5-prime edge
    TCCTACTTTA TCCCTGGTTT GATGTAATAG CTTATGAAGT GTTATCGGAT 
    GAGGAGAAGA GGGAGATATA TAACAAGTAT GGTGAAGAGG GACTTAAACA
    GTTTTCTGCA AATGGAGGAA GAGGAGGAGG AGGAGGCGGC ATGAATATGC
    AGGACATCTT CAGCTCGTAA GTTTTCTGCA AATGGTAACT CTTTAGGATC
    CAACTAGAGG TACAAGATAC AGGGTCACTA GGATCTGTCT GATCTTCTAT
    CCTGTTGAAC CCATCTTAAC ATAGAATTCG TGTGAGTTTT ATTTATTGAT
    AGTGGATACA ATTGAATTTG GTAATGTTAA GGGACTTTAC TCTGTAGCGT
    GAATAGTTCC TAAATTTGGA TAACGTTTTA CATTTGTGTT TAAAGAAGGG
    ACTTTACTCT GTAGCGTGAA TAGTTCCTAA ATTTGGATAA TGTTTTACAT
    TTGTGTTTAA AGGGTGCAGA TTGCTAATTT GCAGAGATTA TTGATGTGTT
    TAATAGGTTT TTTGGTGGAG GTTCGATGGA GGAAGAAGAG AAGGTTGTCA
    AGGGGGATGA CGTAATTGTG GAACTTGAGG CAACTCTAGA AGATTTGTAC
    ATGGGAGGCT CTATGAAGGT ATGTTAAGCT CCGTGTCAGG ATGTTATTGT
    CATCACTAAT ACATGTTACT CATCTGGGAA ATGTTACTTT GATCCAAATG
    TACTAGAATC AATAGAAATT TGAAACTAGA TTCAT

AT3G62600.1

Model type
Protein coding
Short Description
DNAJ heat shock family protein
Curator Summary
J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.
Computational Description
ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink).
Link
InterPro Scan - TAIR