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GT14202

CSHL Arabidopsis genetrap mutant lines

Original: GT14202

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14202

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 791137 [Map]; Strand: c
      • AT3G03341.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -489; Region: promoter
      • AT3G03350.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -46; Region: promoter
      • AT3G03350.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -136; Region: promoter
    Flanking Genome Sequence: GT14202 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACAT 
    GCACATGCAT TTCGTTTATA TATGTATGCT TTATATGTGT TATTTTTTGC 
    AAATCTTGAA ATCAAAAGAC ATTTCCCATT AATCATAATA ATCATGATCA 
    TGATGAAACT TAAACCTCTG ATTCTAGTCT TTTTCTTAAT GTTCCTCGTG 
    TTACACTATC TCACTAATCA AACCAATTCC GATTCTTACC TCGGAGGACA 
    TACCGGAATT ACAACTCCGT TGCGGCCACC ACCACCAAGA AAGACATACT 
    GCAGCAGGTC ATCTTCTCTT CCACTCGACG ACGAAATACA TGTATGTAAC 
    CGGTGTGCCT GGGGAACTCT ACCGGACCGA GCCAGATGAC CAATGGGGAT 
    ATAATTCTAG TGTAAACCGA AATCTGGTTA AGTGTCTCTT GGTTATTGTA 
    ATTGTGGGGT TTGGAGTTAT AAATTTGTGA AAACAGACAG CTATTGTTTG 
    TGTAAGCAAT TTTATGGGTA GCTCTAAAAT ACGGTGTTTG CATCGTAATA 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 791079 [Map]; Strand: c
      • AT3G03341.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -431; Region: promoter
      • AT3G03350.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -104; Region: promoter
      • AT3G03350.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -194; Region: promoter
    Flanking Genome Sequence: GT14202 - 5-prime edge 
    CTTTCTCCCT GTGTGCATGT AAAGATATGC AGCGTCATAT CTCTACATCA 
    CCTATATGCA TTTGGTGGAG ACCAGATCAT ACACATTAAA ATGCAAAATT 
    GTAAGGTTCT TCAGTTTTGA ATAAGTCTTA GATTGACGAG GTCAATTTTT 
    TCTGTTTACC ATTAGTACTA TATAAGGTTA TAGGATTTTT GTAATGGACT 
    GGCCTGGTTG CTTTTGAATC CGGCCTGTTT TAAGGCCCAT CTCTTTTTCG 
    GTGAAGAAGC TAAAAAAAGA GTTTTAATTT CGTTTGAAAA TTTCCGGGAG 
    CATAAAGAAC TATCGAAGCA ACACGTATCC ACCTTAAACC ACATGTATAC 
    TCTAGAACAC AACACGTGTT AAAGTGAAAG ATGAGAATAA TACGGACCGA 
    CCCTACGTAC TTGATAAAAA CAATTAAGAA GAAGAATTTA AAAAGAGAGT 
    GAAATGATTC GCTTGAGTCT CTATATAAAC ATCACAATCC AACTCTCCAT 
    CATCTTCCAC TTCTTGTTCT ACTCATATTC CATACATCAT ATCCCTATAA 
    CATCAACAAA CATTTCATCG GGCTT

AT3G03341.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03350.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03330.1); Has 56644 Blast hits to 56586 proteins in 3128 species: Archae - 370; Bacteria - 40229; Metazoa - 3300; Fungi - 2140; Plants - 1046; Viruses - 2; Other Eukaryotes - 9557 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03350.2

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03330.1).
Link
InterPro Scan - TAIR