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GT13291

CSHL Arabidopsis genetrap mutant lines

Original: GT13291

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13291

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1823656 [Map]; Strand: c
      • AT3G06030.1 - [+] show detail - NPK1-related protein kinase 3
        Distance: -816; Region: promoter
      • AT3G06035.1 - [+] show detail - Glycoprotein membrane precursor GPI-anchored
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT13291 - 3-prime edge
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGAC 
    TTCTGTAGCT GTTGATTCCT GTGAGAAGAA TGTCCTCTTC ATCTGTAACT
    CAGAAGACGC TTGATTAAAG TCTATATCAT TTGCAGAAGC ATATTCACAA
    TCTCTAGTTA AAGTAAATTT TTGTTCTTTA TTTGTTATCA AGAGAAGGAA
    AGCAAATTAT ACACTTGAGA AAGTATTAAC CTTTTCAAAT AAGTTCAACT
    TTCTCATGAT TGAGATCTAT GGAAGAACTT TTAATTGAAG TGAACAGATC
    CTAACTCCTA AGAGATTTCA GACCAGATCT AAAGATCCTG AATAAACACT
    ATAAAGAGAG ACAGAAAGAG TTTCAAGAAC AGAGATTTAC TTCAACAAGA
    AAACAATGGA AGAAAGAGAG GAAGTTACCG GTGTCGCTAA GAACAGGGCG
    ATTGAGGCAG AGGAGTATGG AGAGAAAGAG AAGAAGTGGA AGCTTGTCGA
    TCGCCATTGA AGCAGGTTTC TAGAGTTCTC AAATGATATT TTGATGGTGA
    TTGGCTTATA ATAATTGAGA AAGGAGAGTG AGAGAAATGG TTACTTCGCT
    TTTACTCATA A

AT3G06030.1

Model type
Protein coding
Short Description
NPK1-related protein kinase 3
Curator Summary
NPK1-related protein kinase 3
Computational Description
NPK1-related protein kinase 3 (NP3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: cortical microtubule organization; LOCATED IN: apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 1 (TAIR:AT1G09000.1); Has 135037 Blast hits to 132652 proteins in 4867 species: Archae - 156; Bacteria - 15291; Metazoa - 50641; Fungi - 13369; Plants - 33230; Viruses - 554; Other Eukaryotes - 21796 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06035.1

Model type
Protein coding
Short Description
Glycoprotein membrane precursor GPI-anchored
Computational Description
Glycoprotein membrane precursor GPI-anchored; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Glycoprotein membrane precursor GPI-anchored (TAIR:AT5G19250.1); Has 86 Blast hits to 85 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR