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Mutant Lines
GT13264

GT13264

CSHL Arabidopsis genetrap mutant lines

Original: GT13264

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13264

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 14449407 [Map]; Strand: c
- AT2G34210.1 - [+] show detail - Transcription elongation factor Spt5
  Distance: 0; Region: exon14 (CDS)

GAGAAACAAA AACACAAACA AATGATTGGA TCTTGAAACT GCGAAATTAA 
GGTGACAAAC CTCCAGAATG CCGCATTGGA GTCCGGGAAG GATGCATAGG 
AGTTTGGCTT CCCATATTAT ACTGCGGGGT TGCGACTACA TTATCAGTCA 
TATCTGATAT CGCCTTCCGC TCAACTGTTC ATACAAAAAG AGTTAGAATT 
CATTCAACAT TCAGCAACCA GCTGTGAATA GAAGTGAAAT TACAGCGGAG 
CTTGGCTGTG GCAATCTTGG CCTCCAGTTC CACACGCACT AGCTTATCTT 
TGACTTCAAC TAAACGCCCA CTATATCCCT TGAAAG

AT2G34210.1

Model type: Protein coding
Short Description: Transcription elongation factor Spt5
Computational Description: Transcription elongation factor Spt5; FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, transcription initiation factor activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter, translation, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), Transcription elongation factor Spt5 (InterPro:IPR017071), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: global transcription factor group A2 (TAIR:AT4G08350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR