F29501

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F29501

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F29501

Determination of introduced cDNA(s)

RAFL09-46-O14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-46-O14 - Resource: pda09834

full reading [+] show sequence

ATTTCTCGAA CATGGCGTCT ATTGTTCAAC CATCGCCTAC TTTCCCGGCG 
CTAAATCTCC GGCGTTCTTC TCTGATTCGT CCGCCTTCTT CCGTTCGATT 
TCCTCTTAAG TGTAACGCGG CGGATCCGTA CAAGTTCGAC GGCGGAAACT 
CTGCCGGTTT CCATCTGCTT ACTGGCGACA CCGTTCCGGC TAGCTTTTCG 
AGGACACGTT TGGAAGATTC GATTTATCAG AACACCACAC GACTTCGTAT 
CTTTTCCGGC ACTGCTAATC CTATTTTGGC TCAGGAGATT TCTTGCTATT 
TGGGTCTGGA CCTTGGGAAA ATCAAGATTA AACGCTTTGC TGATGGTGAG 
ATCTATGTTC AGCTACAAGA GAGTGTAAGG GGATGTGATG TGTTCCTTGT 
ACAGCCTACA TGCCCACCTG CAAATGAAAA CCTTATGGAA TTGCTCGTTA 
TGATTGATGC TTGTCGGAGA GCATCAGCCA AAACTATCAC GGCTGTGATT 
CCTTACTTTG GTTATGCACG AGCTGATAGG AAGACTCAAG GACGTGAATC 
TATTGCAGCC AAGCTTGTGG CCAATTTGAT TACACAGTCT GGTGCAGACC 
GTGTCCTTGC TTGTGATCTT CACTCCGGAC AGTCTATGGG CTACTTTGAT 
ATTCCAGTCG ATCATGTTTA TGGCCAGCCT GTCATACTTG ATTACCTAGC 
AAGTAAGGCC ATATCCTCTG AAGATTTGGT GGTAGTTTCA CCTGATGTTG 
GTGGCGTCGC AAGAGCTCGC GCTTTTGCGA AAAAGTTATC TGATGCACCT 
TTAGCAATAG TTGATAAAAG ACGTCATGGG CACAATGTTG CAGAGGTGAT 
GAACTTAATT GGGGATGTTA AAGGGAAAGT AGCCATAATG GTGGATGACA 
TGATTGACAC AGCAGGAACC ATAAGCAAAG GTGCGGCTCT GTTACACCAA 
GAAGGAGCAA GAGAAGTATA CGCTTGTACC ACTCATGCCG TTTTTAGCCC 
TCCTGCAATC AGTCGACTAT CGAGCGGACT GTTTCAAGAG GTGATCATAA 
CCAACACGAT TCCATTGTCA GAGAAGAACT ATTTTCCTCA GCTTACAGTT 
CTCTCAGTAG CAAACCTTCT TGGGGAGACC ATATGGCGTG TTCATGATGA 
TTGCTCGGGA GCCATTGAGC CATTTTCGAC GTTGGGGATT GATTGAGTGA 
TGGAAAAAGG GTAAAGAATG TACTTATAGC CTCTCAGTAG TATGAATTTC 
TGATAATGTA CAAACTCTTT TCCGCTGTAA AAATGTTAGA CTTGAGTGT

Gene models with high sequence identity

AT2G44530.1 [+] show detail - Phosphoribosyltransferase family protein
E-value: 0; Score: 99.85

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	4.7e-64
HMMTigr	Phosphoribosyl pyrophosphokinase	7.3e-130
PatternScan	Phosphoribosyl pyrophosphate synthetase, conserved site	0
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1,2,3,4	3.8e-256
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE	3.8e-256
superfamily	PRTase-like	1.8e-63
HMMPfam	Phosphoribosyltransferase	1.9e-11

See the detailed result >

AT2G44530.1

Model type: Protein coding
Short Description: Phosphoribosyltransferase family protein
Computational Description: Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11478 Blast hits to 11230 proteins in 2819 species: Archae - 260; Bacteria - 6194; Metazoa - 633; Fungi - 714; Plants - 217; Viruses - 15; Other Eukaryotes - 3445 (source: NCBI BLink).
Link: InterPro Scan - TAIR