F24047

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F24047

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24047

Determination of introduced cDNA(s)

  • RAFL09-42-O16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-42-O16 - Resource: pda08365

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-42-O16 - full reading 
    ACCAATTCCA ATCCTGTTTC CTTGGATCAG AGATACGAAT CTGAATCACA 
    ATCTCGAGAT CTTCAGTGTT TTCCAACGGT GATTGATGTT TCACGTGGAA 
    GAAGAAAGCA GTGGAGGCGA TGGGTCTGAG ATTGATGAGG AGTTTGGCGG 
    AGACGATTCA ACGACGTCAT TGTCGCGATG GGTGTTCGAT GAGAAAGATG 
    ATTATGAGGT TAATGAAGAT TACGACGATG ATGGATATGA TGAGCATAAT 
    CACCCGGAAA TGGATTCCGA TGAGGAGGAT GACAATGTGG AGCAGCGTTT 
    GATTCGCACT AGCCCTGCCG TTGACTCTTT CGATGTAGAT GCTCTTGAGA 
    TTCCTGGAAC TCAGAAAAAC GAAATCGAGG ACACTGGTAT AGGAAAGAAA 
    CTCATACTTG CTTTGCAGAC ACTTGGGGTT GTATTTGGTG ATATTGGAAC 
    TAGCCCATTG TATACCTTCA CTGTCATGTT CAGAAGATCT CCAATTAACG 
    ACAAAGAAGA TATTATTGGA GCCTTGTCAT TGGTTATATA CACTTTAATA 
    TTGATTCCTC TTGTAAAGTA TGTACATTTT GTTCTTTGGG CCAATGACGA 
    TGGCGAAGGT GGGACGTTTG CTTTGTATTC GTTGATCTGC CGGCATGCAA 
    ATGTTAGCCT TATCCCAAAT CAACTTCCAT CAGATGCTCG CATATCAGGC 
    TTTGGTTTGA AGGTTCCGTC TCCAGAACTT GAAAGATCAT TGATAATTAA 
    AGAAAGACTT GAGGCGTCAA TGGCCTTGAA AAAGCTTCTT CTGATTTTAG 
    TTCTTGCCGG CACTGCTATG GTGATTGCTG ATGCTGTTGT TACGCCAGCA 
    ATGTCAGTAA TGTCTGCTAT CGGTGGTCTG AAGGTTGGAG TTGGTGTTAT 
    AGAACAAGAT CAGGTGGTCG TGATATCAGT CAGCTTTCTT GTGATCTTGT 
    TCAGTGTACA AAAATATGGA ACCAGCAAAT TGGGGCTTGT TTTGGGTCCT 
    GCTTTACTTC TGTGGTTTTT TTGTCTAGCG GGCATTGGAA TTTACAACCT 
    CGTAAAATAT GACAGCAGCG TTTTTAAAGC GTTCAATCCT GCATATATCT 
    ATTTCTTTTT CAAGAGAAAC TCTGTAAATG CTTGGTATGC ACTTGGGGGT 
    TGCGTTTTAT GTGCAACTGG ATCGGAGGCC ATGTTTGCAG ATCTTAGCTA 
    TTTCTCTGTT CACTCTATCC AGCTTACTTT TATCCTTCTG GTGTTACCTT 
    GCCTCTTGCT GGGTTATTTG GGTCAAGCCG CATACCTCTC TGAAAACTTC 
    AGCGCTGCCG GGGATGCTTT CTTTTCGTCA GTTCCAAGTT CTTTGTTCTG 
    GCCAGTCTTT CTCATTTCTA ATGTTGCTGC TTTAATTGCC AGTCGTGCAA 
    TGACAACAGC CACATTTACA TGCATCAAAC AGTCAATAGC ACTAGGCTGT 
    TTCCCACGTC TTAAAATCAT TCACACCTCA AAGAAATTCA TTGGACAGAT 
    TTATATACCG GTTCTTAACT GGTCCCTTCT GGTGGTGTGT CTGATCGTTG 
    TCTGCTCTAC CTCAAATATC TTCGCGATTG GAAACGCTTA TGGCATCGCA 
    GAGCTGGGAA TTATGATGAC TACAACAATT TTGGTGACCC TTATCATGCT 
    TCTTATCTGG CAGACGAACA TCATAGTTGT GAGCATGTTT GCAATTGTTT 
    CCCTGATAGT CGAACTGGTT TTCTTCTCAT CCGTTTGTTC AAGTGTGGCT 
    GATGGAAGTT GGATAATCTT GGTTTTTGCT ACAATTATGT TTCTCATAAT 
    GTTTGTTTGG AACTACGGGA GTAAACTGAA GTATGAAACT GAAGTCCAGA 
    AAAAGCTACC AATGGACCTA CTACGAGAAC TGGGCAGTAA CCTTGGGACA 
    ATTAGAGCAC CCGGTATTGG TCTACTTTAT AATGAGCTAG CTAAAGGAGT 
    TCCGGCAATA TTTGGTCATT TTCTAACCAC CCTTCCTGCA ATCCATTCCA 
    TGGTTATCTT CGTGTGTATA AAGTATGTCC CTGTTCCAAG TGTGCCTCAG 
    ACCGAGAGAT TTCTTTTCAG ACGTGTATGC CCAAGAAGCT ATCATTTATT 
    CCGCTGTGTA GCCAGGTATG GATACAAAGA TGTGCGGAAG GAAAGTCACC 
    AGGCGTTTGA GCAGATACTG ATTGAGAGTC TAGAAAAATT TATACGTAAG 
    GAAGCACAGG AGCGTGCACT TGAGAGTGAC GGAGACCATA ATGATACAGA 
    TTCTGAGGAT GATACGACTC TGTCCAGAGT TCTGATAGCA CCCAATGGAA 
    GTGTGTATTC ACTTGGAGTG CCTCTCTTAG CTGAGCACAT GAATTCGTCA 
    AACAAGCGAC CCATGGAGAG AAGAAAGGCC AGCATAGATT TTGGGGCAGG 
    TCCTTCATCG GCGTTGGATG TGGAGCAGAG TCTAGAAAAA GAATTGTCGT 
    TTATACACAA AGCGAAAGAG TCAGGGGTGG TGTATCTACT GGGACATGGG 
    GACATAAGGG CTACTAAGGA TTCTTGGTTT CTGAAGAAGC TGGTAATAAA 
    TTACTTGTAT GCTTTCTTGA GGAAGAACTC CAGGAGAGGG ATAACAAACC 
    TAAGCGTTCC GCATACACAT TTGATGCAAG TTGGAATGAC TTATATGGTA 
    TGAACAAGAC CCCGATCAAA CTACTGGTTT TCATCTACTC GCAAGTCTCA 
    TGAATTGTCG AAGAACATGA AACACTTACC AATTCAAGAG ATTTTTTTTT 
    TCTTTTACAC ATTGTTGCAA AAGTGTGATG GAGTTATAAA AGTACAGGAG 
    AAACAAAATG ATTTTTTTGT ATTGAGAGTT GCTATTTGAT TCTGTGTTTG 
    TTATTTATTG ATTGATTTGT ATTGGCTTGT CCCAGTCTTG AGTATTGGAA 
    TATAGAATGA AGGACTTGCT CTTGC

    Gene models with high sequence identity

    1. AT4G33530.1 [+] show detail - K+ uptake permease 5
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam K+ potassium transporter 3.4e-268
    HMMTigr Potassium uptake protein, kup 1.7e-242

    See the detailed result >

    AT4G33530.1

    Model type
    Protein coding
    Short Description
    K+ uptake permease 5
    Curator Summary
    potassium transporter
    Computational Description
    K+ uptake permease 5 (KUP5); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3492 Blast hits to 3446 proteins in 1048 species: Archae - 13; Bacteria - 2408; Metazoa - 14; Fungi - 115; Plants - 797; Viruses - 4; Other Eukaryotes - 141 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR