F23326

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23326

Determination of introduced cDNA(s)

RAFL09-33-I23 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-33-I23 - Resource: pda08221

full reading [+] show sequence

ACCCTATATA AACATATCCA AAAACCGCAA GAAAGCTCAC AAGAAATCTC 
CTCCCATGGC AGATTCAAGT TCTTCTCTCC CTCCTCTTTG CGAGAAGATC 
TCATACAAAA ACTATTTTCT AAGAGTTGTG GATCTCACGA TTCTAGGCTT 
TCTCTTTTCT CTTCTCTTGT ACCGAATTCT ACTTATGAAC CAAAACAACT 
CCGTTTGGGT TGTGGCTTTC CTCTGTGAAT CCTTTTTCTC TTTCATATGG 
CTTCTTATTA CCAGCATAAA ATGGAGTCCT GCTTCATATA AATCATATCC 
TGAAAGACTT GATGAAAGGG TTCATGACCT TCCATCGGTA GATATGTTTG 
TGACTACTGC GGATCCTGTT CGGGAGCCGC CGATTCTTGT AGCAAACACG 
TTGCTTTCGC TGTTAGCAGT GAATTATCCA GCGAATAAAC TTGCTTGTTA 
TGTATCGGAT GATGGATGCT CACCTCTCAC TTACTTCTCT CTCAAGGAAG 
CTTCTAAGTT CGCCAAGATT TGGGTTCCCT TCTGCAAAAA ATATAACATT 
AAAGTTAGAG CTCCTTTTAG ATATTTTTTG AACCCTCCAG CCGCAACAGA 
AAGTTCTGAA TTCAGTAAAG ACTGGGAAAT AACCAAGAGG GAGTACGAGA 
AATTAAGCAG GAGGGTGGAA GATGCCACTG GAGATTCCCA TTGGTTGGAT 
GCAGAAGATG ACTTTGAAGA TTTCTCGAAT ACAAAACCAA ATGATCATTC 
AACTATAGTA AAGGTGGTAT GGGAGAACAA GGGAGGTGTC GGAGTCGAGA 
ACGAGGTTCC TCATTTTGTA TACATTTCAA GAGAGAAAAG ACCAAATTAT 
CTTCATCATT ACAAAGCTGG AGCCATGAAC TTTCTGGTAA GAGTGTCAGG 
GTTGATGACA AATGCACCAT ACATGTTGAA CGTAGACTGT GACATGTATG 
CTAATGAAGC AGATGTGGTG CGCCAAGCAA TGTGTATATT TCTACAAAAA 
TCAATGAATT CAAACCATTG TGCTTTTGTT CAATTCCCTC AAGAGTTCTA 
TGATTCTAAC GCCGACGAAC TCACCGTCTT ACAATCATAT TTGGGACGAG 
GAATTGCGGG AATCCAAGGA CCTACATATG CAGGTTCAGG ATGCTTCCAC 
ACTAGAAGAG TTATGTACGG TCTATCAATA GATGATTTAG AAGATGATGG 
AAGTCTTTCT TCACTTGCAA CAAGGAAGTA TTTGGCTGAA GAGAATTTAG 
CTAGAGAATT TGGGAACTCT AACGAGATGG TGACATCGGT GGTCGAGGCA 
TTACAAAGAA AACCAAATCC GCAAAATACC CTTGCAAACT CCCTCGAAGC 
GGCTCAAGAA GTGGGACATT GTCATTTTGA GTACCAAACT AGCTGGGGCA 
AAACTATTGG TTGGTTATAC GAATCAACAG CGGAAGATGC AAACACGAGT 
ATCGGAATCC ATTCGAGAGG GTGGACTAGC TCATATATAT CTCCGAAACC 
ACCAGCGTTT CTTGGGGCTA TGCCACCGGG AGGTCCGGAA GCGATGCTCC 
AGCAGCGGCG ATGGGCCACA GGACTGCTCG AAGTCCTTTT CAACAAACAA 
AGTCCGTTGA TCGGAATGTT TTGTAGGAAA ATAAGATTTC GACAAAGCTT 
GGCTTATTTA TACATTTTCA CTTGGGGTCT AAGGTCAATC CCTGAGCTTA 
TTTATTGTCT CTTGCCTGCT TATTGCCTAC TCCACAACGC TGCCTTATTT 
CCCAAGGGAG TTTATTTAGG TATAGTCGTC ACACTTGTGG GAATGCATTG 
TCTTTACTCT CTATGGGAAT TTATGAGCCT TGGTTTCTCA GTACAATCGT 
GGTTTGCCTC CCAATCATTT TGGAGGATAA AAACCACTTG CAGTTGGTTA 
TTTAGCATCC CTGATATCAT ACTCAAGCTA CTTGGAATCT CGAAAACTGT 
TTTCATAGTC ACTAAAAAGA CTATGCCCAA GACAATGTCA GGATCTGGAT 
CCGAAAAATC TCAACGAGAA GTTGATTGTC CAAACCAAGA TTCCGGTAAA 
TTTGAATTTG ATGGCTCGCT TTATTTCTTG CCTGGCACAT TTATCCTTTT 
AGTGAATCTA GCCGCTCTAG CCGGTTGTTC GGTGGGTCTA CAACGTCACA 
GAGGAGGTGG TTCGGGTTTA GCAGAAGCTT GTGGATGTAT TTTGGTGGTT 
ATATTGTTTC TTCCATTTCT AAAGGGTATG TTTGAGAAGG GAAAATATGG 
TATCCCATGG TCTACTCTTT CTAAAGCTGC CTTTTTAGCA GTTTTATTTG 
TTGTTTTCTC TGTGGGAAAC TAGTATACTG ATATGGCTTT AATTTGTAGC 
TAAAAACTGC TAATATGAAA ATAATTATTC TCTAGT

Gene models with high sequence identity

AT2G32530.1 [+] show detail - cellulose synthase-like B3
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Cellulose synthase	7.8e-82
HMMPfam	Cellulose synthase	3.8e-46

See the detailed result >

AT2G32530.1

Model type: Protein coding
Short Description: cellulose synthase-like B3
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: cellulose synthase-like B3 (CSLB03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B4 (TAIR:AT2G32540.1); Has 2368 Blast hits to 2281 proteins in 468 species: Archae - 7; Bacteria - 755; Metazoa - 0; Fungi - 3; Plants - 1582; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link: InterPro Scan - TAIR