F20729

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20729

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F20729

Determination of introduced cDNA(s)

  • RAFL06-80-P17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-80-P17 - Resource: pda03794

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-80-P17 - full reading 
    AACCAAAAAA ATCAAAAAGA TTACTCTCTC TTTAATATCT GGGTTTATAC 
    TACAGTCCTT CTTTGGTGCA AAGATCCCAA AAAATCAAAA TCGAAAGAGA 
    GAATAAATCA AAAGGAAGAA TCTTTATCTG CTTTCTCTCG ATGAGGATCC 
    GGAAACGACA AGTGCCTCTT CCTTTATCGT CTCTATTACC AGTTCCTCTA 
    TCAGATCTCT ACTTTAACCG CTCACCGACG GCCACCGCGA GATACTTTCG 
    CGGTGGTTAT AAAGACGGCG GTGATGATTT TGGTTCTCTT CAGCTTTCGC 
    TTCCGCCGCC GTCGCAGATT TCTGATCGGC TTATTCAAAG AGATTTGATA 
    AAGAAGAAGG AGGAGGTCAA GGCTTTGGAT GATGATAATG GTGATGTAGA 
    CGTCAAGAGT CGTACTGATG CATCGGGCAG CAAGAATGTT AATCCCCGAG 
    GAGAATCCGT CTCTTCAATA CAAGTTGTCG AGAAGAATGA AAAGGTTGTG 
    TCTTTGAGGA AGAGAAGAGG CTTTATCAAC TTTGAGGATT ACGAAGATGA 
    GGAAGATGAA GAAGCTAGTG GCGGTGGAGG CCGTATTAAT AAAGGGAAAA 
    AGAAAGCGAA AAAGAGCGGT GGTGGGTTAG AGGAAGGATC ACGGTGCAGC 
    CGTGTTAACG GTAGAGGATG GAGATGTTGT CAGCAAACGC TTGTTGGTTA 
    TTCTCTTTGT GAGCATCATC TCGGTAAAGG AAGGGTAAGG AGCATGAACA 
    AGAGTGGTGG TGGTCGTGGC GGCGAGAAAA AGGCGGTGGT GGTGGAAGTG 
    AAGAAGAAGA GAGTAAAGCT TGGCATGGTA AAGGCACGTT CAATAAGTAG 
    TTTGCTTGGA CAAACCAGCA CTAGTGGTGG TACTAGTGGT GATGTTGATC 
    AGGGTGAGAT AAGTGCACCT GCTGATCAGT TCGCTGCATG TGATAAGTAG 
    GTCTGTTGAT CAGCATTTGC ATGTATATGG ATATGTGTAT GTTTATGTAC 
    ATGATGATAA TGGGCATAGC TCTATGTATT GGGTGTGTGA ACATGTCTAT 
    GTGTAGATTG ATCGAGGACG TAATTGGCCT TTGCTCTGCA TCTTATATAT 
    ATTGGTGGAT GTTTCCAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT2G42040.1 [+] show detail - CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 sp...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G42040.1

    Model type
    Protein coding
    Computational Description
    CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR