F15108

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15108

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15108

Determination of introduced cDNA(s)

  • RAFL11-13-G16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL11-13-G16 - Resource: pda18003

    full reading [+] show sequence

    Nucleotide sequence: RAFL11-13-G16 - full reading 
    CCGATCTTTC TCGGGATTTC GAAATTTGAC GGTGATCTGA TTTCCAACGA 
    TTTTTTCTCT TCCATGGCTT TTTTTCGCTG ATCGGTAAAT CAAACGTTTG 
    TTTCGGTTTC GATGGTGGAA GCTACGTCGA ATTTGACGCC GACTCAGAGA 
    TATGCGGCCG GCGCATTGTT TGCGATCGCT TTGAACCAAG CGCAAATCAA 
    CCAGACTCAG CCGCTGGGAA CCCCGGCGGC GGAAGACGAC GACGGAGGCG 
    ATGAAGAGCG AAGAAGCAAT TGCAGTAGCG GAGATTCTGT CTCCGATGAC 
    CCCAGCCTTT GGGTACACGA GACGTCTGGC CTTCTTCGCC CCGTTTTCAG 
    GTGCTTTCCC AAAATCTCTT GTCGATCTCA TCGATTTTGA AATTCCTTTC 
    GAGTCTTGGT TGTCTATGAC CGTTGAAATC ATCTGGTTGA TTAGTAGTTC 
    GCTTTAGCTC TGTTTGTAAT TCGTTTCTAT CCACAGATGT CTTGAGATTG 
    ATTCACCGGC TTGGCTTGGT CTCGAGCAAA CAGCTTGCTC TTCTCCGGCT 
    AAGCACCACA TCGGGGCGTT CACGAGGTTA CTCTCAGAAG AAGCGAATGA 
    TGCTTCTGCC GAGATGGTGG AGCAAGAGAT GGCCTTAGCT AAAGCTGCTG 
    ATGCTATGGT GCATAGCATT CAATGCTCTG TATCTATAGA TGCTAAGAAG 
    GAGAAGCATC AAGAATACGA AAACGAATGC CGTGAGAAAT ATGCTGTTCC 
    TGAGGTAAAA TCAAAAGATG TTGATTTGGA TAAAGAGAAG GATAAGAAGG 
    AAGCGGCTGA AAGTGCTGCA AGAGAAGGTC TTGAAGCGGG TGTGGTTATT 
    ATAGATGGAA GCCACAGCCT GAAGTTCTTG AAAATGAGAA GTCTGTTGAG 
    GAAGTAACAT TGCTTAGTCA TCAGAGGAAG ATAAATGTTC TTTATGAGCT 
    ACTTTCTGCT TGCTTGTCAG ATAAACATCA CGAGGATAAG AAATGTAAAC 
    GGTGTAGAAA AGGCTATGAT GCGCGTCACC GTGTTGCTCT CCGTTTACTT 
    GCGACCTGGT TTAACATTGA GTGGATTAAA GTGGAAGCAA TTGAGACAAT 
    GGTCGCATGC TCTGCCATGG CCATTCAGAA GTCTGCTGAA ATGAAGGGTG 
    AAGATAATCT AACTCCTACG ACTTCATGGG CTAAGTGGAA GCGAGGAGGC 
    ATCATTGGTG CCGCTGCTAT TACAGGAGGC ACTTTGATGG CCATAACTGG 
    TGGATTGGCT GCTCCAGCTA TAGCTGCAGG ATTTGGTGCA TTGGCACCAA 
    CACTGGGCAC AATTATTCCG GTGATTGGAG CTGGGGGTTT TGCTGCTGCG 
    GCTAGTGCCG CAGGAACTGT TGCTGGCTCC GTTGCGGTTG CAGCATCGTT 
    TGGAGCTGCT GGAGCTGGTC TCACAGGGAC TAAGATGGCA AGGAGAATTG 
    GGGACCTTGA TGAGTTCGAA TTTAAAGCTA TTGGCGAAAA TCATAATCAA 
    GGACGGTTAG CAGTGGAAGT CTTGGTTGCT GGTGTTGTTT TTGAAGAAGA 
    AGATTTTGTG AAACCATGGG AAGGGTTAAC TAGTAATCTG GAGAGGTACA 
    CGCTGCAATG GGAGTCCAAG AATCTTATCT TAGTGAGCAC AGCGATTCAG 
    GATTGGCTTA CTTCAAGACT TGCAATGGAA TTGATGAAAC AGGGAGCAAT 
    GCACACTGTG TTGGCCTCTC TTTTAATGGC ATTGGCATGG CCAGCGACAA 
    TCTTAGTAGC TGCTGATTTC ATAGATAGCA AATGGAGTAT TGCTATTGAC 
    AGGTCGGATA AAGCAGGAAG ACTTCTAGCT GAAGTGCTAC AAAAAGGCTT 
    GCAAGGAAAT AGACCCATCA CTCTAGTTGG TTTTTCGCTT GGTGCTCGTG 
    TCATCTTCAA ATGCCTCCAA GCTCTGGCTG AGACAGAACA AAACGCTGAA 
    CTTGTGAAGA GAGTTGTTCT TCTTGGAGCA CCCATTTCAA TCAATAGTGA 
    AAACTGGCGA GACGTAAGGA AGATGGTCGC TGGAAGATTC ATCAATGTTT 
    ATGCCACAAA TGATTGGACC CTTGGTATCG CATTTCGTGC TAGTTTAATT 
    TCCCAAGGAT TAGCCGGAAT CCAACCAATA TGTATCCCTG GTATCGAAAA 
    CGTGGATGTA ACCGATATGG TGGAAGGTCA CTCTTCATAT CTATGGAAAA 
    CTCAGCAGAT TTTAGAAAGA CTCGAGATCG ACACATATTA CCCTGTTTTT 
    CGAGACACTC TTTAACCAAA ATCAAATTAG ATAAGTATCA CACAATATAG 
    GGAACCAAAC TTTGTCACAT GTTTGAAATG TACACAAATA AAAGTCGATA 
    AACGTTAGAC ATTAATTAAA GCAAGGCTTG TATTTTGTTT GTTTGTTTTA 
    GCTGTCGTCT TTGGGTTTTT TTTGTTTAAA CGTTCGTGGA TGCCGGCGAA 
    AGACAAGGGC TTCTGTATTG TAATTATTTG TATGAAAACA CATTGCACCG 
    CCATCGTTGA CTATGGCCGT GTTTTAGCTT CGCCGTTCTT GTTTCCTTGT 
    TTACATACAA AAGTCTAAAC TGATCGAAAA TGTTACTGAA CAAAAAAAAA 
    GAGACTACAC TTGAATTTCA AAAAAAAAA

    Gene models with high sequence identity

    1. AT4G36210.1 [+] show detail - Protein of unknown function (DUF726)
      E-value: 0; Score: 99.92

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Protein of unknown function DUF726 3.9e-188
    HMMPfam Protein of unknown function DUF726 3.9e-95
    superfamily alpha/beta-Hydrolases 4.3e-07

    See the detailed result >

    AT4G36210.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF726)
    Computational Description
    Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 675 Blast hits to 638 proteins in 219 species: Archae - 12; Bacteria - 101; Metazoa - 133; Fungi - 230; Plants - 68; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR