F14431

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F14431

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F14431

Determination of introduced cDNA(s)

  • RAFL05-19-O22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-19-O22 - Resource: pdz87533

    5 prime EST [+] show sequence

    Nucleotide sequence: RAFL05-19-O22 - 5 prime EST 
    TGACTTCTTG TTCTACTCAT ATTCCATACA TCATATCCCT ATAACATCAA 
    CAAACATTTC ATCGGCTTGA TCAGTTTTTA ACCAACGATG ATTCCGATAT 
    GCGTGCAGTG CGGAACGGGC GGAAACCCTT GTAGATGCAA AGTGGTAGGA 
    CCGACGTTAG GGCTTGTGGC GTTTGTAGCA GCCGGAATAG TTGAATGGCC 
    GGTCGGAGCA TTGGTTTATA TCTTTAAGCA CGCCAAAGGT CGCCGCATTA 
    TGGGTCATCC GGCCACCCAT GTTTATCCCA AGGTCTCTCG TTCCATTCCC 
    ATATGATTAT GATGACTTAT TGACTTCATG ATCACTCACT TCTAAGTTAT 
    ATTGTATCTT ATCTTTCTTC CTTTTCTGTA TTTCTCTAAG AACTTTAATA 
    TTTTGATTAC TAAAGTAATA ATGTACGTGA AAAAGTTAAT AAATATCCGC 
    TTTCAATCAG AAAAA

    Gene models with high sequence identity

    1. AT3G03341.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

    3 prime EST [+] show sequence

    Nucleotide sequence: RAFL05-19-O22 - 3 prime EST 
    GATTGAAAGC GGATATTTAT TAACTTTTTC ACGTACATTA TTACTTTAGT 
    AATCAAAATA TTAAAGTTCT TAGAGAAATA CAGAAAAGGA AGAAAGATAA 
    GATACAATAT AACTTAGAAG TGAGTGATCA TGAAGTCAAT AAGTCATCAT 
    AATCATATGG GAATGGAACG AGAGACCTTG GGATAAACAT GGGTGGCCGG 
    ATGACCCATA ATGCGGCGAC CTTTGGCGTG CTTAAAGATA TAAACCAATG 
    CTCCGACCGG CCATTCAACT ATTCCGGCTG CTACAAACGC CACAAGCCCT 
    AACGTCGGTC CTACCACTTT GCATCTACAA GGGTTTCCGC CCGTTCCGCA 
    CTGCACGCAT ATCGGAATCA TCGTTGGTTA AAAACTGATC AAGCCGATGA 
    AATGTTTGTT GATGTTATAG GGATATGATG TATGGAATAT GAGTAGAACA 
    AGAAGTCAGG GGGGGGGGGG GGGGGGGGAT T

    Gene models with high sequence identity

    1. AT3G03341.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

    AT3G03341.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR