F12806

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F12806

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F12806

Determination of introduced cDNA(s)

  • RAFL09-36-H03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-36-H03 - Resource: pda06139

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-36-H03 - full reading 
    AAATCAAAAC TTTGCCTCTC CACAATTCGC AGCCATTTTT TACTCTCTTC 
    TTCCCCTGAG AACGACAGGA GAAAGAATAA AAACCCTAAA TTTCTTTAAT 
    TTCGGCGCTT CAGATTATCG TTGTTAAAGG TTTTTGATTG ATTTTGTTTA 
    AATGGGCGAT CTTGCTATGT CCGTAGCAGA CATCAGGATG GAGAATGAGC 
    CTGATGATTT AGCTAGTGAT AATGTTGCTG AGATTGATGT GAGTGATGAA 
    GAGATTGATG CTGACGACCT TGAGAGACGG ATGTGGAAAG ATCGTGTCAG 
    GCTTAAAAGA ATCAAAGAGC GACAAAAAGC TGGCTCTCAA GGAGCTCAAA 
    CGAAGGAGAC ACCTAAGAAA ATCTCTGATC AAGCTCAGAG GAAGAAAATG 
    TCTAGAGCTC AAGATGGTAT CCTTAAGTAC ATGTTGAAGC TTATGGAAGT 
    CTGCAAAGTT CGCGGGTTTG TCTATGGTAT AATACCGGAA AAGGGCAAGC 
    CTGTGAGTGG TTCCTCTGAC AATATAAGAG CTTGGTGGAA AGAGAAAGTG 
    AAGTTTGATA AGAACGGTCC TGCTGCTATT GCTAAATACG AAGAGGAGTG 
    TTTAGCGTTT GGGAAATCTG ATGGGAATAG GAATTCACAG TTTGTTCTCC 
    AGGATTTGCA AGATGCTACT TTAGGGTCTT TGTTATCTTC TTTGATGCAA 
    CATTGTGATC CTCCTCAAAG GAAGTATCCG TTGGAGAAAG GGACGCCTCC 
    GCCTTGGTGG CCAACGGGGA ATGAAGAATG GTGGGTGAAA CTCGGTCTGC 
    CTAAAAGCCA GAGTCCTCCT TACCGAAAAC CTCATGATCT CAAGAAGATG 
    TGGAAGGTTG GAGTTTTAAC GGCAGTGATC AATCATATGT TACCTGATAT 
    TGCAAAGATT AAGAGGCATG TTCGTCAGTC GAAATGTTTA CAGGACAAGA 
    TGACAGCTAA AGAGAGTGCG ATTTGGTTGG CGGTTTTGAA CCAAGAGGAA 
    TCTTTGATTC AGCAGCCTAG CAGTGACAAT GGAAACTCCA ATGTGACTGA 
    GACACATCGT AGGGGTAATA ACGCTGACAG GAGGAAACCT GTGGTCAACA 
    GTGACAGTGA CTATGATGTT GATGGGACAG AGGAAGCTTC AGGTTCAGTT 
    TCATCTAAAG ACAGTAGAAG AAATCAGATT CAAAAAGAAC AACCAACAGC 
    CATCTCACAT TCAGTAAGAG ATCAAGATAA AGCAGAGAAA CATCGCAGAA 
    GGAAAAGACC TCGAATTAGA TCCGGAACTG TCAATCGACA AGAGGAAGAA 
    CAACCTGAAG CTCAACAAAG AAACATCTTA CCTGATATGA ATCATGTTGA 
    TGCCCCTCTG CTAGAATATA ACATCAACGG TACTCATCAA GAGGACGATG 
    TTGTCGACCC AAATATTGCC TTAGGACCAG AGGATAATGG TCTGGAACTA 
    GTGGTTCCTG AGTTCAATAA CAACTATACT TATCTTCCAC TTGTTAATGA 
    ACAAACTATG ATGCCTGTAG ACGAAAGGCC AATGCTTTAT GGACCAAACC 
    CTAACCAAGA GCTTCAATTT GGGTCAGGGT ACAACTTCTA CAATCCCTCT 
    GCAGTGTTTG TACATAACCA GGAAGACGAC ATTCTCCATA CACAGATAGA 
    AATGAATACA CAAGCACCAC CTCACAACAG TGGGTTCGAG GAGGCCCCAG 
    GAGGAGTACT TCAACCCCTT GGTTTACTCG GAAATGAAGA CGGTGTAACA 
    GGGAGTGAGT TGCCTCAGTA TCAGAGTGGC ATTCTGTCTC CATTGACTGA 
    CTTGGACTTT GACTATGGTG GTTTTGGTGA TGATTTCTCA TGGTTTGGAG 
    CTTAGTGTCT TGCCATTTTT TTTGGGAGAT TACATAGTTC AAAAGGACAT 
    GGCAATAGTC TGGCTAGTAC AGTTACTTTC TCTTCTTCAT TTCTTCTGAT 
    CTTATATTCT TCCTCTTTTT TTCTTATAAT ATTTTCTTAG ATTTGTTAAG 
    AGAAACAATT TTCCTTTTGA ATAAGTTGCC AGAAGAACTG CTTTGCCCGT 
    TGTAATGGTC TCTAGGGAAA GCAGTTAGCG TATCATCATT TGTAAATTTA 
    CCTGTGAGTA ATTCATCAAG TTAAGAGAAT TAAAAAAAAA AAAAAAA

    Gene models with high sequence identity

    1. AT1G73730.1 [+] show detail - ETHYLENE-INSENSITIVE3-like 3
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D G3DSA:1.10.3180.10 4.10001399699343e-63
    HMMPfam Ethylene insensitive 3 1.30000000000004e-129
    Coil coiled-coil 0

    See the detailed result >

    AT1G73730.1

    Model type
    Protein coding
    Short Description
    ETHYLENE-INSENSITIVE3-like 3
    Curator Summary
    Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.
    Computational Description
    ETHYLENE-INSENSITIVE3-like 3 (EIL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, cellular response to sulfate starvation, regulation of sulfur metabolic process, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: Ethylene insensitive 3 family protein (TAIR:AT3G20770.1); Has 298 Blast hits to 298 proteins in 81 species: Archae - 0; Bacteria - 53; Metazoa - 2; Fungi - 1; Plants - 234; Viruses - 4; Other Eukaryotes - 4 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR