F05832

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F05832

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F05832

Determination of introduced cDNA(s)

  • RAFL09-62-G22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-62-G22 - Resource: pda08536

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-62-G22 - full reading 
    AAAGTTTCAA TCTTTGAGTT TCTCCGAAAG ATTCAAAGCA AAACCAAGTT 
    AGTTATAATG TCCTCACTCT GTTTCTTTTA ATCCAATTGC TAGTCTTTTT 
    GCATCTTTCT TGTGCCCGCT CGAATTGTTT CAGTCTTAGA AGACATGAGA 
    GAATCGTTAG TTGCAATCTT GGTGACTGTT ATATCAGTTC TTGGAGCAAT 
    TCACCAAGTG AAATCTCATG AAGACCAACC TTTATCAGGA ATTGCTGTCC 
    ATAAGATTAC ATTTGGTCTC AATGAAAAAG CTTATGTCAA AGCATCTCCA 
    ACAGTTCTTG GATCTAACGG TCAACATAGT GAATTAGTAT TGGTCCAATA 
    TAGTTCTCCG AAACCATCTG ATGATGATTG GATTGGAGTG TTTTCTCCTG 
    CAGATTTCAA TGCTTCGACT TGTCCAGGAG ATAACAAAAT GGTCCAACCA 
    CCTCGACTTT GTTCAGCGCC TGTCAAGTTT CAATATGCAA ACTTTAGTAA 
    TCCAAGATAC ACCAATACTG GAACTGGTTC CTTGAAGCTT CAACTGATTA 
    ACCAAAGATC GGATTTCTCC TTCGCGCTCT TTTCTGGCGG TTTGTTGAAT 
    CCCAAGCTTG TGGCAATCTC AAACAAAGTA GCTTTTGAGA ATCCAAACGC 
    ACCAGTTTAT CCGCGGTTGG CGCTAGGCAA AGAATGGGAT GAAATGACAG 
    TGACATGGAC TAGTGGTTAT GGACTCAACC TAGCTGAACC TGTTGTTGAG 
    TGGGGCGTTA AAGGAGGAGA ACGTAAACTG TCACCTGCTG GAACATTGAC 
    CTTCGCGCGT AACAGCATGT GCGGTGCTCC TGCAAGGACC GTGGGATGGC 
    GTGATCCCGG ATACATACAC ACAGCTTTTC TCAAAGAGTT ATGGCCAAAC 
    TCCAAGTATA CCTACAGAGT TGGTCATAGA TTGTCCAATG GTGCATTGAT 
    CTGGAGTAAA GAATATCAAT TCAAATCTTC TCCTTTCCCG GGACAAAACT 
    CTGTCCAACA AGTTGTAATC TTTGGAGACA TGGGAAAGGC AGAAGTCGAT 
    GGCTCAAGCG AGTACAATGA TTTCCAACGC GCTTCTCTCA ACACCACAAA 
    GCAACTTATT AAAGATCTAA AGAAGACTGA TGCAGTTTTC CACATTGGAG 
    ATATTTGTTA TGCAAATGGA TACCTTTCTC AATGGGACCA ATTCATAGCA 
    CAGATTGAGC CTATTGCTTC CACTGTTCCA TATATGATTG CAAGCGGAAA 
    CCATGAGCGT GTCTGGCCCA ACTCAGGATC GTTTTACGAG GGTTTAGACT 
    CTGGAGGAGA ATGTGGTGTT CCAGCTGAGA CAATGTTCTA TGTTCCTGCT 
    CAAAACAGAG CTAAGGTCTG GTACTCGAGT GACTACGGAA TGTTTAGGTT 
    CTGTGTGGCT GACACAGAAC ATGACTGGAG AGAAGGAACA GAGCAATACA 
    ATTTCATTGA ACACTGCTTA GCATCAGTCG ACAGGCAAAA GCAGCCATGG 
    CTGATATTCC TCGCTCACCG TGTTCTCGGT TATTCTTCCA CATATTTTTA 
    TGCGGAAGAA GGCTCTTTTG CCGAACCTAT GGGAAGAGAA AGTCTTCAGA 
    AGTTATGGCA GAAGTACAAA GTCGACATTG CTATCTATGG CCATGCACAT 
    AACTACGAGA GAACATGCCC GGTTTACCAG AGTGTATGCA CGAGTCATGA 
    GAAGAGTAAC TACAAAGCTC CATTGAATGG AACCATTCAC ATTGTTGCTG 
    GAGGTGGAGG AGCTGGTCTT GCTGAATTCT CTGATCTTCA ACCGAATTGG 
    AGTCTGTTCA GAGACTATGA TTACGGATTC CTTAAACTTA CAGCCATTGA 
    TCACTCAAAC CTTCTGTTTG AGTACAAGAA GAGCAGTGAC GGACGAGTCC 
    ACGATTCTTT CACGATATCA AAAGATTACA GAGACATCTT GGCTTGTGCG 
    GTTGATAGTT GTCCTGCAAC TACACTTGCT TCATAAAAAC TTTTCAACTG 
    CTTGAGCTCT TCTGTACTCA CTTGTTCCCT CTTCATTGTT AAACTGTTAT 
    AATGTTTACA CATCAATTAT ACGCACTTTG CA

    Gene models with high sequence identity

    1. AT1G13750.1 [+] show detail - Purple acid phosphatases superfamily protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther ACID PHOSPHATASE RELATED 8.4e-112
    Gene3D Purple acid phosphatase, N-terminal 1.6e-06
    Gene3D no description 2.2e-85
    superfamily Metallo-dependent phosphatases 7.3e-69
    superfamily Purple acid phosphatase-like, N-terminal 6.5e-25
    HMMPfam Metallophosphoesterase 3.6e-15

    See the detailed result >

    AT1G13750.1

    Model type
    Protein coding
    Short Description
    Purple acid phosphatases superfamily protein
    Computational Description
    Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR