F04251

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F04251

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)

Invisible phenotypes

Original: F04251

Determination of introduced cDNA(s)

  • RAFL06-74-G11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-74-G11 - Resource: pda03496

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-74-G11 - full reading 
    GAAGCTTTTG GATTTCTAAT GTGTGTGAAT CGTGATGTTG TCATCAGGAC 
    AGATGATGGG CCATGTCGTG GCCCGAACTC AGATGATCTT GTCTCGAAGT 
    AACTTCGCCG ATTGTATACG GTGTCAGGGC GTGAGAGTTT CAAAAACCCT 
    AAAAATGGGG ACAAAGCGAC CCACTTGCCC TTCTTGCGAT AAACCTAGCC 
    AGCTCTGTCT CTGCAAGAAG ATGAGATCTC CATGTTTTGA TAATCAGGTG 
    AGTATTACTA TTCTTCAGCA TAGTCTCGAG AGAAAACACG CGCTAAATTC 
    TACTCGAATC GCTAGATTAG GGCTTAAGAA TGTTGGTGTG ACTACTGTTT 
    TCGATGTTCA TGATGAGGCA GAGTTCTTAA TCAGGGTTAT TGGATCGGGT 
    TGCAGCAAGA TTGACACGAA TCATTTGGAT TCTGAGTATA GGGTAGAGAA 
    TGTTGCTTCT TTGGAACTTG ATGATAGCTT TAAGTTAGGT AGTAGTGGCA 
    ATGTGGAGAA CTTAGAATCT GAGAAGAATG TGGTGCTTGT TGATCATGGA 
    AGCTTGGAAA TTGCTGAAAG TTTGAATCTT TCTCAACATT TGAGTGAAAT 
    TTCTTATCGG GATTCGCGGG TTAGGGATAA GATAGGTTCT TATGAAGAAG 
    ATTTGATAAA AATCTGTATG AAGAAACATG GTGTCATCAG CAATGTCTCA 
    CACTCTTTGA TGCTTGAAAC CAATGTGAAG GTTCTTAGTT TTGATCATAT 
    ATTGGCTTCT CCTGCAGCCA TGGATGTCTT GGCAAAAGGT TTTATGGTAA 
    CAAAGTTTTC AGAAGGAAAG CAAGAGTTTG AGCTCGAGGT TCCTCCTGGA 
    TCAGCTTTGT TGTTCCCGAG CGAAGAATCG GTAAAGATCA ATTATCTTAA 
    AGAGAAAGAA GAGTTAAAAG TAAGGAATCT GATTGTTCTT GATGGGACTT 
    GGTCGAAGGC TAGAAGAATA TACCTTGAGA ATCCATGGCT AAAGCTTTTA 
    CGTTGCCATG TGAAGCTAGA AATAGAAGGT ACAAGTTTAT ACAAAGAAGT 
    ACGACGGCAG CCAAGAGCGG GATGTTTATC CACGATAGAG AGTATTGTAT 
    ACGCGATGAA GGAGATCGGT GAAGATCCTG AAGGTTTAGA TAATATGTTG 
    AATGTTTTTG AATCCATGGT TGAAGATCAA CGAAGATGTA AAGATGAGAA 
    CTTTAACAAG ATTATCTGAA AGACAAAATT ACTCTGCTGT TGTAACTTGT 
    AAGCTGAATG AATTAGATTC TTCAATTTTG

    Gene models with high sequence identity

    1. AT5G54880.1 [+] show detail - DTW domain-containing protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam DTW 1.4e-09
    HMMPfam DTW 5.3e-22
    HMMPanther UNCHARACTERIZED 6.1e-110

    See the detailed result >

    AT5G54880.1

    Model type
    Protein coding
    Short Description
    DTW domain-containing protein
    Computational Description
    DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR