ET5730

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET5730

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 6738924 [Map]; Strand: w
- AT1G19460.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 0; Region: exon1 (CDS)

TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TACGACAGAA 
CATCCATAAG GCACAGGTGG AAGTGATTCG AGTTTGCTCA AACGTAAAGA 
AGAAACCTTG TTTCGATGGA GAATGTACCA GTTTGGGGCA TTTGTGTCAG 
GGAATCGGAT GGCGGCGTAA AGAAAGGTTT CGGAAAGACC GAGGCGCGAA 
CGCGTTTCGT AGAGTTCTGA CGAAGCGATG AGATTGAAAA AGTAACTTGA 
GACGGAAGAT AGACTAGGGT AATCACATTT CCGGATGAGT GCGACGCAAG 
CTTCCGTGAG TTCGTTTGGA ATTGGAAAAG ATACCGAGCG ATTATCTTCT 
TCTTCTTCCT CCTTGGGCTT CTTGTTTTGA TTCTCGT

5 prime edge [+] show sequence

Chromosome: 5; Position: 15427229 [Map]; Strand: c
- AT5G38540.1 - [+] show detail - Mannose-binding lectin superfamily protein
  Distance: 0; Region: intron3 (CDS)

TTTCTCCCTG GATGGTGGTA CTTTCAACAG TGTAAGAAAG ATCTACATTG 
GACTAAACGA AAATGTTGTA GGCTTTGTCA AGTTTATGTA CTACAAAAGC 
GCTCGTGTTG TCATCGGAGA TGATCATGGC AACAAGACCA CGATATCTGA 
AGACCAAGAG GTCACTGATA CAATTTCAGT AATATATAGT ACTACTTGGT 
CAACTTATTA TCATTCTCAA TGTATTTCTT TTTCTTGTTT TGCAGTTCGA 
GTTGGATCCG CTTGAACGTA TCACATCAGT GGAGGGTACT TATGATGATA 
AAATCGGAGG TATAACCATG CTTAGGTTCA AGACCAACAA AAAAGACTCT 
CCGTACTTTG GATTCGGTAC ATTACCAAGC TTCGTGCTTC ACAAGGATAA 
TCACCAGATC GTTGGGTTCC ATGGAAAATC CAGTAACATG CTTCATCAAC 
TTGGGGTCCA TGTTCTACCC AATGGTTTTA AATTTGTTTC TTAAGGATTT 
CGTACCCTTT TTTTTTTTT

AT1G19460.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G19470.1); Has 1605 Blast hits to 1542 proteins in 141 species: Archae - 4; Bacteria - 96; Metazoa - 403; Fungi - 4; Plants - 1026; Viruses - 35; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G38540.1

Model type: Protein coding
Short Description: Mannose-binding lectin superfamily protein
Computational Description: Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT5G38550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR