ET167

CSHL Arabidopsis genetrap mutant lines

Original: ET167

Phenotypes

Morphological phenotypes

Original description

  • fused leaves
Anatomical entity
/structure development stage		 Phenotypes
vascular leaf (PO:0009025)
  • fused with (PATO:0000642)

Original: ET167

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 4300490 [Map]; Strand: w
      • AT2G10910.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET167 - 3-prime edge 
    GNATCGTAAC CGACCGTTTT CATCCCTAGT AATGAGATAG GGGAATCACA 
    AGGGTGCCTT ATTTGCCAAG TTCAAGAAGT GGTGGAAGCA TGTTGATATA 
    TTGTGTAAGG CGTATATATT AATACCAATA CATGATGTGT AAGTAGTTTT 
    CCTTCTACCC CTGCAATTAC AACTTTACGA TATGAGCTTA AACCAAAAAC 
    TGTCGTCACT GTCTCTCTGA TGGAAAAATG ATAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 4300509 [Map]; Strand: w
      • AT2G10910.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET167 - 3-prime edge 
    AATGAAANGC AGTNGNCACG ACCGTTACCG ACCGTTTTCA TCCCTGGATG 
    AAAGTANNGA NGAGANANTC CGGTNCCCNA NCGGATCGTT TCNGTATTNN 
    NNNCACTCNA NTAGATATAT TGTGTAAGGC GTATATATTA ATACCAATAC 
    ATGATGTGTA AGTAGTTTNC CTTCTACCCC TGCAATTACN ACTTTACGAT 
    ATGAGCTTAA ACCAAAAACT GTCGTCACTG TCTCTCTGAT GGAAAAATGA 
    TAACCCTTTC NTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 4300582 [Map]; Strand: w
      • AT2G10910.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET167 - 5-prime edge 
    ACNTNTCTCG CGGTAAAGAC AGAGATGCCA ATCGANATAA GTAACAAAAA 
    TTGTGAATCA CAAGAATGCC AAGATATACA TTATTTTCGA AAGTATCGCA 
    TTGTTATAGT TACTTTTTAT TTTACATATG GCTGATCAAA GTATAAGACA 
    ATAGCCTTTA AACATCACGA GAACTTAGGA TTGTAAATAA AAAAATAAAC 
    ATAATGCGTT AGGAAAACCA TTGGAACATT TTCTTGATAT AATCAGGAGA 
    AAGAATCACC TTGTAAATAT CCCCGAGCTT CTTGTAGAAA CAAGTGTTAA 
    ATAAATGACA ATCAGGGGAG ATTTGATTCG CAGAAGATAC TTGTTGGTGC 
    AAGAAAGCCA TATATATGAT AGATATAGTT GTCTATATTT ATAGTTGAAT 
    GTGGAATATA TCGGATTACA TCACAGATCT ATATCCAGTT TGGATATATT 
    GATNTTGTCT ATACTTATAG TTGGATGTGG AATGTAATTG GTTATATTAG 
    AGATCTATAT CCAGTTTGGA TATATTGAAT ATTCAGTATA AAGATGAGCC 
    ATATAATTGA CTACATTAGN AGATCTATAT CCAGTTTCTA GTTNGCTGAA 
    TACAAGCTAC AAAATCCTAT TATAATTTCC AAGGCCGATG TTGATATATC 
    GACGTATATG TTAAATATAA TCTATTATGT GATGCAACTA TATCCACTTA 
    CTTAAAAATT TAGTTAGTGT TAACATAAAT GTTT

AT2G10910.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.5e-24 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)
Link
InterPro Scan - TAIR