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ET14447

CSHL Arabidopsis genetrap mutant lines

Original: ET14447

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14447

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 214177 [Map]; Strand: w
      • AT4G00460.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 3
        Distance: -480; Region: promoter
      • AT4G00460.2 - [+] show detail - RHO guanyl-nucleotide exchange factor 3
        Distance: -480; Region: promoter
    Flanking Genome Sequence: ET14447 - 5-prime edge 
    TTTTAAGAAG AATCTTTGGT CGGTCTATAG TAACACCTCC ATTGGGAATT 
    TTATTTTAAT TCTATGTGTC AACCGTTTAT TAAATTAGAC CAATTATCAC 
    ATGGTTGGAG ATTGGCTTAT CCCCATGTAG CCTACACGAT GAACCGCAAC 
    TCATAATAGG TTAATATTTA TATTAGTGTA ATGTATTATG GTTTCAATTT 
    GAGTTGTATA GTTATAATTT AGTTTAGCAC ATGATAATTT AATGTAATGG 
    AGAAGACAAG TATATATTTG CATGGTTCGT GCGTTAGACA GACGTGCGTC 
    CCATTTTCTC GTTGTACACG CATTTTACGC ATTTACTTAA TCTATGGGTC 
    ATTATTTTAG TGTACTATGG ACTATGATAT TATACAATAT TAATAAGTTT 
    CAACATATAC ACCTTTATTT ACTTGTTGAG ATATGTTCCA TATACTTATA 
    TTTTAAAAAT AAACTTAATA TAAGTATGTC TAACATATTC AACAAATTTT 
    AGTTAATAGA AAGTGAACTA AGGAGTATAG ACAATGCATA CATATAACTA 
    GGTAGCAAAA AATT

AT4G00460.1

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 3
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
Computational Description
RHO guanyl-nucleotide exchange factor 3 (ROPGEF3); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 2 (TAIR:AT1G01700.1); Has 292 Blast hits to 291 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00460.2

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 3
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
Computational Description
RHO guanyl-nucleotide exchange factor 3 (ROPGEF3); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 2 (TAIR:AT1G01700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR