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ET14365

CSHL Arabidopsis genetrap mutant lines

Original: ET14365

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14365

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 383848 [Map]; Strand: w
      • AT4G00900.1 - [+] show detail - ER-type Ca2+-ATPase 2
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET14365 - 5-prime edge 
    CTACTTTATC CCTGCCTCAG TTCCAGTGAT TCCCATGGCG ATACCAATGT 
    CAGCAAGTTT CAAAGCAGGA GCATCATTCA CACCATCACC TGTCATTGCA 
    ACTATTTCTC CCATTTCCTT AAGCATCCTA ACGATTTCTT GCTTATGCCT 
    TGGCTCAGCT CGAGAGAACA CTTTCCCTCC AGATTTTGAC AGAATCTCGG 
    ATCTCCGTGA AGCCGGAAGA GACATAAACT CTTTACCGGT GAAGCTACTC 
    TGCGAAAGAT CTTCATTCTC CGAAAACAAT CTAATCTCAC AACAAATAGC 
    TTCAGCTGTT GATTTGTTAT CTCCAGTTAT AACCATTACT CTAATCCCAG 
    CGTCTCTGCA ATCTTCAATT GCTCTTCCAA CTTCTTCACG CGGAGGATCT 
    CTTAGACCAA CAACTCCAAC GAAGATAAGA TTCGTTTCGA TGTTTGAATA 
    GCTAGAAGGG TCCAAAAGCT TCTTGTGTGA AGGATGTTCT TCGGAAGAGT 
    AATCCGAAAA CTCTCCTAAT TCGTCTTTGT AAGCTAATCC TAAACATCTT 
    AATCCTTTTG AAGTCATTTC AGAATGTTTC TTGAGGATTA CTTCTCTGCT 
    AGATTCATCT AAAGCTACAA GAGATCCATC AGCAAGCTGT GCAAAAGAAC 
    TTCTCTCAAG TATACTCTCA GCAGCACCCT GCAAAGAAAA AGAAAGGGGA 
    GATTCACAAA ACGTTCTTCA CCAAAAACAA GAGAAGAGA

AT4G00900.1

Model type
Protein coding
Short Description
ER-type Ca2+-ATPase 2
Curator Summary
Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.
Computational Description
ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR