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ET14284

CSHL Arabidopsis genetrap mutant lines

Original: ET14284

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14284

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20963714 [Map]; Strand: w
      • AT1G56050.1 - [+] show detail - GTP-binding protein-related
        Distance: -5; Region: promoter
    Flanking Genome Sequence: ET14284 - 5-prime edge
    GGGCAAAATA CGTATATTAA AAATAAGTGA TTGTGAAAAC AAAGGACCAA 
    TCAACACATT CTCTGTAATT TGCGATAAAA AGATAATAGA CAAAAGAGAC
    GACGAACACA CTTAGAAATT TTGAGCTGAG AGGCTGAGAA AATTAGCACC
    ATGGCGAGAG CAGCTTGTAG CAGTGTCGTC ACGGCTATGG CTTTGTTACC
    CTCTAAGTCT CTTCTCTGTA GAAACCAGTT ATTATTCTCC GGTAATTCCA
    AGTTCGTCGG AGTTTTGACT CTCCAGAAGC GATGCTTTTC CTCCAAAGTA
    AGCATGAGTT TGAAAGCTGG TATCGTCGGT CTTCCTAACG TCGGAAAGTC
    TACTCTTTTT AACGCCGTCG TAAGTCCCAT TGATGCACTT GTCGTTCTTC
    TTTACTCTTC TTCTTNNCAG AGGAATATCG TCAAACACCT TATGTGATTG
    TCTCAGGTTG AGAATGGAAA GGCTCAAGCT GCTAATTTTC CCTTTTGTAC
    GATTGAGCCT AATGTGGGTA TTGTTGCTGT TCCTGATTCG CGT

AT1G56050.1

Model type
Protein coding
Short Description
GTP-binding protein-related
Computational Description
GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink).
Link
InterPro Scan - TAIR