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ET14069

CSHL Arabidopsis genetrap mutant lines

Original: ET14069

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14069

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9684329 [Map]; Strand: c
      • AT2G22770.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -396; Region: promoter
    Flanking Genome Sequence: ET14069 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATTT 
    CTATCAAGAT GGATACATTT ATGGTACGAA TCACATGATT TTGATCTTTA 
    ATTAAAGTCT TGTTAGTTTT CCAATGCCAG ATCTCATCGC ATCGGTGGCT 
    ACTCAAATCC CCACCCATTA ATACCAATTT CAACCAAAAC AATTCCCACA 
    TTTAATTATT TTCAGGACCT TTAATTTACT AAAATTTATT ATTGCTAAAC 
    CTACCGGATC GGGTAAACGG ATATGCGATT CGTCAGCCAC ATTCATATAA 
    CAATTATAAA TAGTATTATT TTTTAACCCA TATGCTCTTT TTCCATGCAA 
    ATATTAATTA TATACTGCAA AATAATGATT ATAAAAAACA AAATTATATA 
    GATCCACTAT AAAGAGTTCA CTCGACCACA TTCACATAAC AAAACAAAAT 
    CATACATACT CCAGAACAAA GGAAAATTTA AAATATATCT CCTTATATAC 
    TCCTAAAGTT TTCTTTCCTT TAGCTTCTTG TTTAGTTTTA TTCTTTCAAC 
    ATTAACTTTT TTTTACTCTC TTGTCAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 57532 [Map]; Strand: w
      • AT5G01170.1 - [+] show detail - Protein of unknown function (DUF740)
        Distance: -630; Region: promoter
    Flanking Genome Sequence: ET14069 - 5-prime edge 
    TTTCTACTTT TGCTTGGCTC TTAGTTTTTA AGTTTAAATA CGACTTTTGG 
    GTAATGGACA AAGCCTGAAA ATTCACTTTT TGCTTCATAA AACAAAATTT 
    GTCAAGGGTA TTTTATTTCT TTCAGCTGAA ATTAAGACGA AAATGGTGGT 
    TTGCTTGTTT TTGTTGCGAA ACGAATAGTA TATCGTATCG ACAACCCCAT 
    GCAAATTG

AT2G22770.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary
regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.
Computational Description
NAI1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 3457 Blast hits to 3451 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 69; Plants - 3252; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01170.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF740)
Computational Description
Protein of unknown function (DUF740); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR