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ET14031

CSHL Arabidopsis genetrap mutant lines

Original: ET14031

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14031

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 472690 [Map]; Strand: w
      • AT1G02360.1 - [+] show detail - Chitinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14031 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATCAAG 
    GAAGAGGTCC AATTCAACTA TCGTGGTAGG TTCATTTCCC TCAACAATGG 
    TCCGTATCTT CATTCAAATA TATATTTTGA ATTCTATCAT TTATAGTTTT 
    CGATTTGTAT AAAACTATAC CATGCAAGAT TCCACATCGT AATTATATTA 
    TTTTCTAATT GTCATTTTAC TTTTTGGGAT ATAAGGAACT ACAATTACGG 
    ACCGGCCGGT CGAGCCTTAG GATTCGACGG TCTAAGGAAT CCAGAAACGG 
    TGTCAAATAA TTCAGTGATA GCTTTTCAAA CAGCACTTTG GTTTTGGATG 
    ACGCCACAGA GTCCCAAACC TTCGTGCCAT GACGTCATGA TCGGAAAATA 
    CCGACCTACG GCGGCGGATT TGGCAGCTAA CCGGACCGGC GGGTTTGGTT 
    TAACCACAAA TATAATAAAT GGCGGTTTAG AGTGTGGGAT TCCTGGAGAC 
    GGACGGGTCA ATGACCGAAT CGGGTTTTTT CAGAATATAC TGGGCTGTTT 
    AAAGTAGCAA CTGGGCCGAA TTTGGACTGT GAAAATCAAA GGCCTTATGC 
    TTAAACAATT AATTTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 472751 [Map]; Strand: w
      • AT1G02360.1 - [+] show detail - Chitinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14031 - 5-prime edge 
    TTTCTCCCTG TTCCTTGATA AGTCTTGTTA GGGAAACAAG GCCACTGTGT 
    ATCAGAAGAA TCACAATAAG TGCTTTGTGG ACTCACTTCT TCTTTAAAGC 
    ATAATCCCCA AGCGTACGGT CCGTCTGGTG CCGTTGCCCA TCCTCCGGTC 
    GTCTCGTGTG AAATCTGAGC CAAAAATGCA GCCACTTCGA GTCGTTGTGT 
    CACGGGGCTT CCTACGCTCC CGAATCTCGG AAACCGCCTC GTCGCTTGGA 
    CAAATGATTC GTAAGTGTAG AAACCATTTG CGGGACAAGC GGTATTGTCC 
    TTGTGGATGA AAATTTTGTT GTAGAGGTCT CTTGGCACTA ATCTCTCGAT 
    TGAGGTGGCT TCGGTTTGGG CGGAAGATAG TAAATAAGAG ATTGAGAGGA 
    AGAAGCATAA GAGGAGAAAA GAGTGTTGTT GAGCCATTTT TAGAGAGGGA 
    TCGATCTTGA TGGTTTTGGT GTAAGAAGAT GAGTTTGTTA TATAGATGTG 
    TAAATGATCA ACGCGTTGAC TTTTGACTTT AACGGTGGAC TTTTTTTTCA 
    TTGGTCTGAA GGTTCGTTTA TACATGCTCT CAT

AT1G02360.1

Model type
Protein coding
Short Description
Chitinase family protein
Computational Description
Chitinase family protein; FUNCTIONS IN: chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, leaf whorl, root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2043 Blast hits to 2034 proteins in 421 species: Archae - 0; Bacteria - 465; Metazoa - 37; Fungi - 5; Plants - 1453; Viruses - 2; Other Eukaryotes - 81 (source: NCBI BLink).
Link
InterPro Scan - TAIR