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ET14029

CSHL Arabidopsis genetrap mutant lines

Original: ET14029

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14029

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 386062 [Map]; Strand: w
      • AT4G00900.1 - [+] show detail - ER-type Ca2+-ATPase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET14029 - 5-prime edge 
    CCTACTTTAT CCCTGCGCAG ACCGAGAAGA TCTTCACAAG CGTATCGTCG 
    AATTGTTCCA ATACAAGATG CCATAAAGGC TTGCCTTTCT CCTTAGCAAG 
    CTCGTTAAAA CCGTACTTTT GACGGCGGAT TTGGACATCT TCGCTAGTTA 
    AACCCTTGTC TAATCTTGTC TTGTACTCTT TCAAACATTG CTCAACAGAC 
    CAAGACCACG CCGAGAACGA CTTCTCCTCC TCCATTGGTT CAAAAGCTTT 
    ACTTTAACTC AAAACGGTTA TTTTCTTCTT GTGTATGTGA GAAACCGTTT 
    ATCAAATTCC TGTAGAAAAA TTTCAATCAA ACAATGAAAT ATCAATTTTT 
    AAACAACAAA TAAAGTTACA GTTTTTATTG ACGGTTTGAT ATCTTTTACA 
    ACATAGAACA TAATAAATAA TCAAAGATCT AAAAAAAATA CAAACCCAGA 
    AACCCAAAAC AAGAACTGAG TTAAACAGAG AGAGAAACAG AGTATAAATT 
    CTTACCTAAA TTCCAAGAAA AACCAGTAAG AGCTTTCGTC ATTGAAATAT 
    CAAACATGAA

AT4G00900.1

Model type
Protein coding
Short Description
ER-type Ca2+-ATPase 2
Curator Summary
Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.
Computational Description
ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR