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ET14027

CSHL Arabidopsis genetrap mutant lines

Original: ET14027

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14027

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 494713 [Map]; Strand: w
      • AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -857; Region: promoter
    Flanking Genome Sequence: ET14027 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCCAC 
    AGTACCTCAA ACTTTACTTT CTCACTTTTT TTCACGAGAG GATTTAGACC 
    AAAACGAATA AATTTAAATG AAAATAGCCC AACTGCTTAG CTTTGACCAT 
    ATAGCATAAT TATTATTCCT ATTTTTGTTT TTTGTTTTGT TTTTTTAGGG 
    TTTCGTGTTA AACTTTCTGA TTTCAAATAA ATCACACAAT TTTACAATGG 
    TCCTTCGTTA TGTCTTTTGG ACCACCGTTT TGACTTCATT CCCCTAATTC 
    CTTTACATTT TCTCCCATTT CCCATTCATT TTCCTTCTTA TTGTTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 494703 [Map]; Strand: w
      • AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -867; Region: promoter
    Flanking Genome Sequence: ET14027 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCCAC AGTACCTCAA 
    ACTTTACTTT CTCACTTTTT TTCACGATAG GATTTAGACC AAAACGAATA 
    AATTTAAATG AAAATAGCCC AACTGCTTAG CTTTGACCAT ATAGCATAAT 
    TATTATTCCT ATTTTTGTTT TTTGTTTTGT TTTTTTAGGG TTTCGTGTTA 
    AACTTTCTGA TTTCAAATAA ATCACACAAT TTTACAATGG TCCTTCGTTA 
    TGTCTTTTGG ACCACCGTTT TGACTTCATT CCCCTAATTC CTTTACATTT 
    TCTCCCATTT CCCATTCATT TTCCTTCTTA TTGTTTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 494766 [Map]; Strand: w
      • AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -804; Region: promoter
    Flanking Genome Sequence: ET14027 - 5-prime edge 
    TTCATCTACT TTCTCCGTGC TGTGGAGGAA CTTCTTCATT TGGGTAAATC 
    CCAAATCCCT GTAAGGTAAA TATTATGTGT TCTTACAAAA TTTGGTTTTT 
    CTATGACAAG TATATTCTTT TGACCAGCTA AGCTAACAAA TGTATGTTCA 
    ATTGGTTATA TATCGATCGG GGCAAGGGTA ATACTCGAAT CTATGTTCAT 
    CTCACTCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 494770 [Map]; Strand: w
      • AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -800; Region: promoter
    Flanking Genome Sequence: ET14027 - 5-prime edge 
    CCTACTTTCT CCCTGCTGTG GAGGAAACTT CTTCATTTGG GTAAATCCCA 
    AATCCCTGTA AGGTAAATAT TATGTGTTCT TACAAAATTT GGTTTTTCTA 
    TGACAAGTAT ATTCTTTTGA CCAGCTAAGC TAACAAATGT ATGTTCAATT 
    GGTTATATAT CGATCGGGGC AAGGGTAATA CTCGAATCTA TGTT

AT2G02060.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR