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ET13885

CSHL Arabidopsis genetrap mutant lines

Original: ET13885

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13885

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 386142 [Map]; Strand: c
      • AT4G00900.1 - [+] show detail - ER-type Ca2+-ATPase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13885 - 3-prime edge 
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT ATTCGCTAGT 
    TAAACCCTTG TCTAATCTTG TCTTGTACTC TCTTCCACAT TGCTCACCAG 
    ACCAAGACCA CGCCGAGAAC GACTTCTCCT CCTCCATTGG TTGCAAAAGC 
    TTTACTTTAA CACAAAACGG TTATTTTCTT CTTGTGTATG TGAGAAACCG 
    TTTATCAAAT TCCTGTAGAA AAATTTCAAT CAAACAATGA AATATCAATT 
    TTTAAACAAC AAATAAAGTT ACAGTTTTTA TTGACGGTTT GATATCTTTT 
    ACAACATAGA ACATATTAAA TAATCAAAGA TCTAAAAAAA ATACAAACCC 
    AGAAACCCAA AACAAGAACT GAGTTATATA GAGAGAGAAA CAGAGTATAA 
    ATTCTTACCT AAATTCCAAG AAAAACCAGT AAGAGCTTTC GTCATTGAAA 
    TATCAAACAT G

AT4G00900.1

Model type
Protein coding
Short Description
ER-type Ca2+-ATPase 2
Curator Summary
Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.
Computational Description
ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR