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ET13881

CSHL Arabidopsis genetrap mutant lines

Original: ET13881

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13881

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 670194 [Map]; Strand: c
      • AT4G01535.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 364; Region: intergenic
      • AT4G01540.1 - [+] show detail - NAC with transmembrane motif1
        Distance: 289; Region: intergenic
    Flanking Genome Sequence: ET13881 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGCTAG 
    AGCATAGAAG AAGAAACAGC TCAAGCTACA ATGAGGAAAT AGCCATGAGA 
    ATTCACAGAG AACTCTCAGA GAAACAGAGA ACAAATGAAG AAGAAGATCA 
    CAAACTCAAC ACAAATCTCA TGAATGATCT GAATTCGTTT TGCTTTCCTT 
    TTACATGATT CTATCTTTGA GCTCCAAATG ATCTCCACCG TCGATCTCAA 
    CTTCTAATCT CTACCCTCCA CGTGTCCATC AGTTCTTAAC CCTTCTTTTA 
    CTATATCAGA CTGGTGCACC CTCGAGAAGG TCCCTTTGTT CATCTCACTC 
    GAC

AT4G01535.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01540.1

Model type
Protein coding
Short Description
NAC with transmembrane motif1
Curator Summary
Encodes a membrane-bound NAC (for NAM, ATAF1/2, CUC2) transcription factor, designated NTM1 (for NAC with transmembrane motif1). NTM1 regulates cell division in Arabidopsis.
Computational Description
NAC with transmembrane motif1 (NTM1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 67 (TAIR:AT4G01520.1); Has 2751 Blast hits to 2734 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2749; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR