1. Home
  2. Mutant Lines
  3. ET13853

ET13853

CSHL Arabidopsis genetrap mutant lines

Original: ET13853

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13853

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24598264 [Map]; Strand: c
      • AT1G66070.2 - [+] show detail - Translation initiation factor eIF3 subunit
        Distance: 0; Region: intron1 (5UTR)
      • AT1G66070.1 - [+] show detail - Translation initiation factor eIF3 subunit
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: ET13853 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TAATTTGGAG CAATTCTATA GAAACCCACC AGAGAATCAA TCGAAAATTA 
    AGATCTAGAA GCGAATTTAA CTGAGAAAGG AAAACCCTTT GATAAGAAAA 
    CATACCGAGG AAAGTCTGAA TCCAAAAGGG TTTTTCGCAG AGGAAGAGAA 
    ATCGCAAGAA AATTGAAGCG TTTTCGTTGG ATTAGAAATC TCCGATGTGG 
    TGGTTTTTGC TTCAGAGGTT AAAAAGAGAT TTAGGGCTTT TGTGTGTTTC 
    CTTTTGTTTT TCGTTAGATT TTATGCCTTT TTATAAAGCC TTTCCACCGT 
    GGCCCCAACA TGTCGAACCG ATCAAAGTAT AGACCAAATT TGTTTGGTCA 
    ATTTCGGTTA GACTGATACG GTCGAACCGA TCACCGTGGC CCCAACATGT 
    AACTTTTTCC ATCTTACACT CTCCATTTTT TTATTCCGTT TTTAATCTTT 
    TTTTTTTGGA GTTTTGGCCC AAAAATTGGA ATTTCCGGAC CAAGTTTAAA 
    GAAATTTTGC CAAAGGGGGG T

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24485979 [Map]; Strand: w
      • AT1G65820.1 - [+] show detail - microsomal glutathione s-transferase, putative
        Distance: 0; Region: exon3 (CDS)
      • AT1G65820.2 - [+] show detail - microsomal glutathione s-transferase, putative
        Distance: 0; Region: exon4 (CDS)
      • AT1G65820.3 - [+] show detail - microsomal glutathione s-transferase, putative
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13853 - 5-prime edge 
    CCTACTTTCT CCCTGATCCT TGGAGGGATG AAGCACCCTT GTATCAGTAC 
    TGGTCTTGGC TTGCTTTACA ACGTTAGCCG TTTCTTCTAC TTCAAAGGTT 
    ATGCTACTGG AGATCCCATG AAGCGTCTTA CTATCGGGTT TGTTCTTTTA 
    TCCTCTTATC AGTGTTCATT ATCTTTATTG ATTAATTTAG TTATGTTAGT 
    CAATAGGATA TAGATTAGAC TTATATATGA GGTTGTTGGA AGTATAGTTT 
    CATTGATTCT AATGAATGAA AATATTTTCG TTAGCTGATT TTTTTTGGTT 
    ATGGTATCAA AGCATTGATC TAAGCTCAAC CATTTTCGGT TTTGCGTATC 
    AAATGTTTCT CCCTTTCTTT GTCTTTGATC TCGGGAAATT TCTTTGTTTC 
    TGCATCACAG CTTTTCTCAT TCCAATTCTT TACTCAGTTC TGTATTTACT 
    ACGACTTGAT TCCGTCTCTA AATCGAGTTT GCGATAGATA ATCTTTGTAA 
    TCTATATTGT TGCAGTTAAG TTAGTCAGAG TAATAGTAAG TGAACATTTT 
    CTTAAAACTG AGTTCTTCTG TTAGGGTATC AGAGCGTGAA GCTAAGCTCA 
    ACAATTTCTT CGTGTTTCCG CAAATTTTTC TGTCTTCGTT CATTTCAATA 
    TTTCTACATT CCGGATTTAC TTGGACTTGA TTTCAA

AT1G65820.1

Model type
Protein coding
Short Description
microsomal glutathione s-transferase, putative
Computational Description
microsomal glutathione s-transferase, putative; FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 397 Blast hits to 397 proteins in 131 species: Archae - 0; Bacteria - 6; Metazoa - 200; Fungi - 90; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G65820.2

Model type
Protein coding
Short Description
microsomal glutathione s-transferase, putative
Computational Description
microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 348 Blast hits to 348 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 87; Plants - 65; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G65820.3

Model type
Protein coding
Short Description
microsomal glutathione s-transferase, putative
Computational Description
microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 388 Blast hits to 388 proteins in 129 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 88; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66070.1

Model type
Protein coding
Short Description
Translation initiation factor eIF3 subunit
Computational Description
Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1); Has 512 Blast hits to 510 proteins in 194 species: Archae - 2; Bacteria - 36; Metazoa - 190; Fungi - 147; Plants - 83; Viruses - 1; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66070.2

Model type
Protein coding
Short Description
Translation initiation factor eIF3 subunit
Computational Description
Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1).
Link
InterPro Scan - TAIR