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ET13829

CSHL Arabidopsis genetrap mutant lines

Original: ET13829

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13829

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17230084 [Map]; Strand: c
      • AT4G36515.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13829 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTGGACTCA 
    CCCATCTGAT GATTCTCTGA AGGTAACTCT CGAGATGATG ACATCCCTCT 
    TCGACAGTAC TGCAAATTGA CGCAATTGCA ATCAGCCAGA GACATTTGAA 
    TCAAAGCAGG AGAAATTCAT ATGAATAAAT CGGTTCAGCT ACCTTAGCAA 
    ACGCGGATCC ACCACCCCGT ATCATCATGG CTTATCGCTG CCCTTTCCTC 
    CCGACCGCGG AAAAGGTTTG TCCAAAGTAT CCCCCTATAT TTCTTCATTA 
    TCTAATAGCC CGATAACGCC TAATCCAGCC CACTTTTTCC GGCCCATCAT 
    ATCTAGTCGA TGTGATCTAT AACATTTTGC ATTTTACATA TCTTTTGTTA 
    GCTAAGCTAA TTAGTTCAAA TTTACATGTG TAGACTTGCG AGAGAATGGA 
    AGAACGTGGA CTAATAATAT AGAGGATATA TACTCAACTA ATCAAGCACA 
    ACTTTACAAA AAATTAAAGA AGAACCATAT ATCACATCAA CGTCCTTCTG 
    AGTTGAATCT GTTCCAAGCT TCCTGGATAT TAATTAGAAC ATTAAGACAA 
    TTCCAGATTC TTGAATGAGC AATTCAGAGA CTGTGTAAAA AGGTGTAACA 
    GAACATGAAC CAATACCTTA AGAAGATCGA AGACCTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17338007 [Map]; Strand: w
      • AT4G36790.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET13829 - 5-prime edge 
    CTTTCTCGTC TTACCATAAC TTGGTGCGGA TCAGCGGTTA ATGCACCGAT 
    GTTTGCAGAA GTGGTTCCTC CAAGGCACCG TACAATGATC TACGCGTTTG 
    ACCGTGCTTT CGAAGGGTCA TTCTCATCTT TTGCTGCGCC TTTGGTGGGA 
    ATTTTGTCTG AGAAAATGTT TGGGTATGAC TCAAGAGGTA TTGATCCTTT 
    GAAAGGTTCC TCTGTTCGTG AGGCTGATGC CCTTTCAAAG GGGCTTCTGT 
    CAATGATGGC TGTTCCGTTT GGGCTCTGTT GTCTCTGTTA CACTCCGTTG 
    CATTTTGTTT TCCAGAAAGA TCGAGAAAAC GCGAAAATCG CGAGCTCTAA 
    AGAAACTGAA ATGATCTGAG AGACTTGCTC ATGTAGTCAT GTTGTGATTC 
    TTTTTATACC ACAAACGATT TTAAAACCAC TATGTGAAGC AAAGGTGGAC 
    TTTTAACCGA GACCAACAGA ATTTGAAAGC TGAAAACGCT TTTTGTTCTG 
    ATCAAACCGA ATAAATCAAA ACGTATGTAT ATATGATTTG AAATTTTGAA 
    TCTAAACCTG AAACTTGAAT AAACTTGGAA CACGTGACCG TAATTGCGGT 
    TAGAAAAATA AGACCGTTGT AAACGGAGCG TAATCGTGAT CAATTTCCTT 
    TTTTC

AT4G36515.1

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36790.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18590.1); Has 13584 Blast hits to 13542 proteins in 1941 species: Archae - 325; Bacteria - 10929; Metazoa - 520; Fungi - 516; Plants - 316; Viruses - 4; Other Eukaryotes - 974 (source: NCBI BLink).
Link
InterPro Scan - TAIR