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ET13788

CSHL Arabidopsis genetrap mutant lines

Original: ET13788

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13788

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18378484 [Map]; Strand: w
      • AT1G49650.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13788 - 3-prime edge
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TACTCCGAAG AATCACTTGT TCTTCTTCAT TTGCTACACC CTCTCTCTTC
    CTCCGCTTCT TTCGCCAACT CCCTCGCTCT TACTCCTCAC CGACCACCAT
    CGCCGTCTCA GGCCGCAACA TTCGCCGACT ATCAACTCCA ACCACTCTTC
    GTTGCATTTG TTCACACTCT TCATCTGAAA TCATCTCCGA GCATCCTCCG
    TTCGTCAGGG TTTACAAAGA CGGTCGTATC GAACGTCTTT CCGGCACCGA
    AACAGTCCCG GCTTCTCTAA ACCCACGAAA CGACGTCGTT TCAAAAGACG
    TTGTCTACTC ACCGGGGCAT AACCTCTCCG TT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18378532 [Map]; Strand: w
      • AT1G49650.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13788 - 5-prime edge
    TCCTACTTTC TCCCTGCTTC GGAGCATGGT TACCGGAATA TTTTCTACGG 
    CGAAAGAGGT TGCACTTTTT TGGATAAGGA ATTTTATGAA GATAGATAAA
    CCGACCGACA AGATAAAAAT CTAATAAGAA TTTGAATACA AAAAGAAAAC
    AAATTAATAT TTTACACATA TTTTTTTCTC ATGTTGAAGA AAATAATAAC
    ACACATTTAA CAGGTT

AT1G49650.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 5 (TAIR:AT1G49660.1); Has 9107 Blast hits to 9083 proteins in 1488 species: Archae - 111; Bacteria - 5471; Metazoa - 421; Fungi - 765; Plants - 1374; Viruses - 3; Other Eukaryotes - 962 (source: NCBI BLink).
Link
InterPro Scan - TAIR