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ET13785

CSHL Arabidopsis genetrap mutant lines

Original: ET13785

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13785

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12486370 [Map]; Strand: c
      • AT4G24025.1 - [+] show detail - pre-tRNA
        Distance: -98; Region: promoter
      • AT4G24030.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT4G24026.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13785 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACCACGAT 
    CTTCTTTTCT TGGTCGTCTT CTGAAACGCT AATCGGATCC AGAAGCCATG 
    GACAAAAGCA TCAGCATCAC CTCCAACGTT AGCACGACGA CTTCCATGGA 
    AAAGATCGAC CACGCCGCTA GCTGGATCAG CGCAACCGTA ATATCCGCTT 
    TCTTCTCCTC ACTCGA

AT4G24025.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: CCC)
Link
InterPro Scan - TAIR

AT4G24026.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G24030.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR