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ET13175

CSHL Arabidopsis genetrap mutant lines

Original: ET13175

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13175

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18413193 [Map]; Strand: c
      • AT5G45440.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13175 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATCTGCT GGCATAATGC 
    TGTCTTCCCA ACACCGTATT CTCCGACAAC CACAAGAGTC TTGAACACCT 
    TGTAAGACTT TTGATCCAAC AAGAAGTGTT GCAATGATTT GATCTCATTC 
    TCGAAACCAT AGATGTCATG GCCTGGAAGT TCAGAATCAG TTTCCACACG 
    ATCGTCCTCT TGTTTTGTTT CGTCACCAGT TGTCCCTAGC CATTCGTTGT 
    ATCTATCAGC GAACCGATTT GTGAAGTCAA CTCTGCCTAC ACTTGTTAAT 
    CCGCGCGATG AATCTTCTTG AGTCATTTCC AAGCAAAAAC TGGGACAAAA 
    AAAAAAAATT GGCGGGGGAA ATCAACAAAG TTTGGTTTTT CCTTTTTTTC 
    CCCCAAAAAA AAAAATTGAG CCAAAAAAAA AAAAAACCGG GGGAAGAGAA 
    AAAAAAAGGG GAAAAACCCC CCCCCCTAAT TTTTTTTTTT TTTTTTCCCC 
    AAATTGGGGG GGGGAAAAAA AAACAAAGCG AAACCCCCAA AAATTGAAAT 
    TCCAATTGAA CCCAAGGGAA AAAAT

AT5G45440.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G45490.2); Has 3890 Blast hits to 3878 proteins in 196 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 8; Plants - 3872; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR