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ET12619

CSHL Arabidopsis genetrap mutant lines

Original: ET12619

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12619

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8352612 [Map]; Strand: w
      • AT4G14550.1 - [+] show detail - indole-3-acetic acid inducible 14
        Distance: -2593; Region: intergenic
      • AT4G14560.1 - [+] show detail - indole-3-acetic acid inducible
        Distance: -8446; Region: intergenic
    Flanking Genome Sequence: ET12619 - 5-prime edge 
    TACTTTCTCC CTGATAACAC CTTTCATTAG ATGCAACAAC ATATGCACTT 
    GTCCCTCGAA TTAATTTTCT CATCAAATCC TTTTGTTTTC TTCTTAACTG 
    GTTAATTAAT GCGTACGATC AATTATCTTC ATGCACATAT GATTAGGGTT 
    TTGAATCTTA TCTATTTCAA GTTCTACAAC ATGAAGCGTA AATATGGTGA 
    ACTTCTATAG TTTGTGGATA CTATTGATTT TTGGTAGATG TAAAGAGTGG 
    ATATTGTTTG ACTACGTGGA TCTATTTTTC ATTATGCATT ATAGATGGTA 
    GGCTCCCGCA GTTCCGCTTG ACTTTTAGCC ATAAACTCAT TTACTCGTTC 
    TAGTGGTAGT GGAGAGGCAT ATCGTATTTA ATTGATATCG TATTATACAA 
    ATTTAAAAAT GTTTACCTTA TTGTTTTACC TACGGATGTC TACGTAAATG 
    TAATCCCTAC AATTTTTTTA TGTGACCCAC CTATGTTTTT AGTTCCAAAA 
    AAGGTAAAGG TGTGGAATTT GGACAGTCGA AGTATAGTAT ATCCAAAAGT 
    TTTGTCAACG ATACTATCCA AAACTCGAAT TATTTGTTTA TTTTTTCATA 
    TCATCTTT

AT4G14550.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 14
Curator Summary
IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.
Computational Description
indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G14560.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible
Curator Summary
auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.
Computational Description
indole-3-acetic acid inducible (IAA1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 2 (TAIR:AT3G23030.1); Has 1898 Blast hits to 1895 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1895; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR