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54-5001-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26753298 [Map]; Strand: c
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2049; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 212; Region: intergenic
    Flanking Genome Sequence: 54-5001-1 - 5-prime edge 
    CTTTGAAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATGT TTTGGTGTTT GAGGTAAGAT CCCATCTTCA 
    TTAATAGTCA CTGTCCCATT CCACTTGGTG TTTTGCATAT GTTTTAATAT 
    CCTTCTTTCA TAAAGTCAAT AGTTTTGTAG TGAATGCANN GCCTGGTCTG 
    ACTTCTCGAC AAATCTCTTC TANCNACTCA TNAAANGATT TCNAGATANN 
    ACATCNACTN ATTGNTNGAC ACCCGNATNA GACCAGACCA AGCCTCNCGT 
    TCAANATACA CACCNGATTT TTCAATGGAN NATACANAGN NNNAGNNCCN 
    TGGTNTATAC AAACCCCNCN CCCNCACGCG ACNAANAGAA AAATATTTTG 
    GGCGGNGGCN CNCNGAAGAA AAAAAAAGCG NNNCGTNCNN NCAAANAAGN 
    AGGGGGAGAG TTTTTTTAAN CNCCCCNGNG GGAAAAAAAA ANNNNCCCCC 
    CCNCCGAAAG GNGGGGGGGN NATTTTTNNG GGGGGAANAA AAAAAAAACN 
    AAANNGGAAA ANTTTNGNNG GGGACTTCAG GGGGNNAAAA AAACCCGNGC 
    NGGGGNNGAA AAACCNTNNT GNGGGGGGGN GNTNTNNCCC CAANGGGNGA 
    NCCCCCCANC CNNCCCCNNN GNAAAAAAAA AAGGNNGCNA NAATAAAAAA 
    ANNNAAGGGG GCCCCCNTTN TNGGNNNNNA ANAANAAAAA AAAAAANGGN 
    GGGGGGGGGG GGCCCCCNAN AANNAAAAAA AANGGGGGGG GGGGGGGNNG 
    NAAAAAAAGG AANAANTNAA AAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26753354 [Map]; Strand: c
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2105; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 156; Region: intergenic
    Flanking Genome Sequence: 54-5001-1 - 3-prime edge 
    ATGTCAGTAA AATTATTGTT TCCCACCTTA TAAATTTTCT TTTCTTACTT 
    TCACATTTAT TATCCATACA CATGAATAGT CCGTTGTTCA GAACAAGATT 
    AAGAAAATGA AAATTGTCCA AACACATAAT TATATGATCT TCTTGTTTCT 
    CTTACCGGTT CAAAATACTT ATCATCTTGT GGTTTTTTGT TCATTTGAAA 
    AGAAAAGTAA ACAATTTGAT AATATAATTA CCTTTTAGTA ATCAAAATTA 
    GATTATTGTT GCCTGGAAGT TGAAGAAATG AAGATTAATG TCTTGTATAA 
    TTTATATTTT GTTTCAGACC TATATATACA TTGTCATGCA AGGAATAGCT 
    GAAAGCAGAT TTTTTTTCTT TTGAGAAAAT TACTACTCAA ATTATCNGCC 
    AAACCGATTA AAATTACTTA ATTTCACCAT CGGTTTACTT ATTTCAAGCT 
    GTCTGAAGTA ATTTATCGGG TGTTACTCTC ATTCTTCCTC NNNGATTTCN 
    GAGTTNNCCT GATTACTTNN ACCCTNNNNG CCGNCNGNCN NNNCCNNNNN 
    GGGNNATNNN NANAANCCNC NACCGGNNNT TGGNAATGAN NNGGGNNANN 
    NAAAANCCNG GNNNGGGNAN GGNNGAAANN ANGGNNNNTN NNNNANNAAA 
    NNGNANNNNN GNT

AT5G67020.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67030.1

Model type
Protein coding
Short Description
zeaxanthin epoxidase (ZEP) (ABA1)
Curator Summary
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
Computational Description
ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6841 Blast hits to 6837 proteins in 1107 species: Archae - 14; Bacteria - 3761; Metazoa - 2; Fungi - 1599; Plants - 605; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR