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54-4787-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26530089 [Map]; Strand: w
      • AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -3290; Region: intergenic
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 146; Region: intergenic
    Flanking Genome Sequence: 54-4787-1 - 5-prime edge 
    CNGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTACATATC TTTCTTAATA CATAAGCAAC TAAAATTACT 
    GTACATAGAG ATGATATTTA TACTACATAC ATGGAATATT TTTATAAAAA 
    AACAAGATTC CATAATGGTT AACTTTCACA AAACTTTGTT TGTTTGTTGT 
    TTGATTCGAT TTATATTAGA ATTTGATGCT TTTTTGATAT AGATATAAAA 
    AGATATTTAG GCTATGTTAT GGACAACGAC GGCTAAAGAT TCTTGACGAC 
    GAAACATCCT CTGTTTTGCT ATGAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26530059 [Map]; Strand: w
      • AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -3260; Region: intergenic
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 176; Region: intergenic
    Flanking Genome Sequence: 54-4787-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    CATATCACTT CCTCAGTTTT AATGATACAG ACTTAGAGTA GAAATGTTGT 
    CTCGCCACAC TCAAAATTAT GACATTACCA AAAAAACCTT TTTAATAAGC 
    T

AT5G66430.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66440.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR