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Mutant Lines
54-4583-1

54-4583-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 16740886 [Map]; Strand: c
- AT5G41820.1 - [+] show detail - RAB geranylgeranyl transferase alpha subunit 2
  Distance: 0; Region: exon1 (CDS)

TTTGAGAGAG AAAGGAAAGA GAAGAAGAAG AACACTGTAT GTACATCTTT 
TGATGGTGAT TGGACATGAA CTGGGACTGG AGGGACCGGA TCTCCAGGGC 
TTTAGCTGCG GTCTCCTCTG GATTCNGAGC CTCCTCTCTC TTACGACCGT 
GCCTTGAGAT TTAGGGAATT GCTTCNCAAT GACGTTTNCT TGTNTAGGGT 
TCCCACCGGA ATCCTNNNAG GGCCCCTCCN TNGATCCTGG AACCGGTACG 
AGTANACCGA GTGACNTNTG NCATNACANN CCCGGTNCAA NNGANATTTN 
CTACCCNGCT TTCNTGTTTA TANNGNAAAC NCTTTGNNGG AGNAACGAGG 
NCACNCACCC CNGGACATNT AGTGAANGCA CAAANATTNN TTTTNTTCNT 
TTCNCNANNT TGCGGGGCGA ACANAAACTT GGGGCCCCAT GNTTNCNNAN 
CNCCCTCTTT TTNCCCCCCG GGGAGGANNN AGGNACGCCC CCCCTGGGGG 
NGGGGNNNNC CCCNCNNANC GGGGGGNNTN NAANANNNNA AANAAANCCN 
CCNTNNNNGG GGNGGGNGNG AAAAATTNNT TGGGGGNCCN NGNNNNNTTT 
TTGGGGGGGC NTTTTTTTNC GNCCNANNAT AANAAAAAAG AANTTTNTNN 
NGGGGGGNAG ACNCCCNGAA CNNAAATNNG GGGGGNCNNC CCCNNGNGNC 
CNCCCCCCTT NNNAAAAAAA AAAAAAAAA

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 16740952 [Map]; Strand: c
  - AT5G41820.1 - [+] show detail - RAB geranylgeranyl transferase alpha subunit 2
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 54-4583-1 - 3-prime edge
```
TTTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
CAACCAACCA ACCAATCATT TGATTTTGGT TTTCCAGTTA CACAAAGGAA 
GCAATTCAAT TAAGCGCGAA GCT
```

AT5G41820.1

Model type: Protein coding
Short Description: RAB geranylgeranyl transferase alpha subunit 2
Computational Description: RAB geranylgeranyl transferase alpha subunit 2 (RGTA2); FUNCTIONS IN: protein prenyltransferase activity; INVOLVED IN: protein amino acid prenylation; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611), Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR