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54-4342-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14362688 [Map]; Strand: c
      • AT2G33990.1 - [+] show detail - IQ-domain 9
        Distance: -447; Region: promoter
    Flanking Genome Sequence: 54-4342-1 - 5-prime edge 
    TTCATAACTT TAAAGTTTAA ACATACACAG ATGGTTAAGC TGTCATAGTT 
    GATATTTAAA GGAAAAATAC CATAAACCAA AGTGGTTTAA GTTTTCCATC 
    TTCTAATTAA TTTTTCACTA CTTTCCAACT TTCTTCTTTT TTTTTGTTCA 
    AACTACTTTT CAACTTCTAA ATTTANAGGA GTATATACNA GTCACNAAAA 
    TGCANATGGG NGTTATATAA TTATGACATC TTATAAGGAA AGTAAAAATA 
    TTCCGTAATA ATTACAAACT CTTCGTATCT TCAAAAAGAC GATNTACAAC 
    GTGATGAAAA AAGAGAGTAN AATCTGACAA ATCTTATGTA TATTTTTTTA 
    ACATTAAACT GTNGGNGTAA CATTNGGATT TAACAATTAC TGATTACTAG 
    TCCAAATAAA ATAAAAATAA AAATGCGGAT TACAGCCTAA TATTTCCAGT 
    CTNTNTACNA GTCACNACGC TGTAATGATG TCCCTTTTAA AGTCTTTACT 
    TCTTCCTCAC TACAGAGACA CAGAGCAAGC AAAAACCCTT TAATCATTCA 
    TTCAGTCACC AAATCTCTTG TTCTGTTTTT CTGTCTCTCT GCTTCAGGGG 
    TTCTTCGCGG CCTTTACCAG TTTTTCAGTT CTTTGACNAG CTTCTTTCAT 
    TGGTCCTGAA CTCAGGGTTT NGGATCTATC TTTNGGTNCT TCGNNGAAAA 
    CTANAACTTN TTTTTGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14362760 [Map]; Strand: c
      • AT2G33990.1 - [+] show detail - IQ-domain 9
        Distance: -519; Region: promoter
    Flanking Genome Sequence: 54-4342-1 - 3-prime edge 
    NNGTAAGGAC NGAGGTATCT TTTGACCGGG CCNACCGTTT TCATCCCTTG 
    ATNGGANAGT TTGAAGTTNG AACTNNCAAG CCACCACCGA TTGATAAATG 
    TGTTAAGAAT TATGATGGTT TTGATGACTG TCTATGAATT ACTAATTGAG 
    ATTGACTATA TATCAACTAA ACTATTTAAA TGTGTTAAAA TTCTTACCAA 
    TCAATAAATA TTTTTAAATC ACTNTTNCTT ACCGGTCAAC TATCTTTTAA 
    TTTTTCAAAT TATACCATTT TTCTAAACCA CANACACTCC TATGATCATA 
    TCATTAAGTA AGATTCTAAT TANATTAAAA GGGGGATGTT GTAGTCCAAG 
    CGGATGTTCC TAAATTTTGT GTGTGTTAAT TAGCTATGTA TTATGTCATT 
    TTCNCTGNTT AACTNCTATT GATANCATAN CTAATTAGNT ATTTNTGTGA 
    ATCANCAATA NGTANGGNNT GNGAATGTAT TAGCGNGGTN NNGTNCTCAC 
    NTTTCATCCA ACCNTGNNCA NATGANGTCN CACTGGAAAC TTATTANTAT 
    NANTNTTATT TCNNNAATTN ANTCGAANNG CNNTNAATNG TGAANNATNN 
    NNNGNNCTTT TCTGCATACA AAGTATATCT GTTNCGTCTT NGTTCTTGAN 
    TTATNTNTGN ACANNTTGGG GGNGNGNGNG GGGANNNATA CCTGCTNTNA 
    GAATNGGGNN NCTCNNAAAN GGGTGNGNTC TNNNNNCGNN GGGNGGNGTG 
    TNCCNTNTGG TNTANAANAN TNGGGNGGCT TNCNCGGGNA AAGCCCANAC 
    GNGGGNNNAC AAANANAAAA G

AT2G33990.1

Model type
Protein coding
Short Description
IQ-domain 9
Computational Description
IQ-domain 9 (iqd9); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 10 (TAIR:AT3G15050.1); Has 664 Blast hits to 663 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 658; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR