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54-4066-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17911198 [Map]; Strand: w
      • AT4G38190.1 - [+] show detail - cellulose synthase like D4
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-4066-1 - 5-prime edge 
    ATTCTCTAAG GGCTCCGGGA GGACGACCGT ACTTGACAGC CGGGTGGTCT 
    GCCAATGGAC GACCTTGGAA CTCTGCAATT GGAATTGACT CAGCTAGGAG 
    TGTGGAGTTC CCAAAGCGCT TGGGGAGTTG TGTGACATCA AGGTCCGGGT 
    CAAAGTCACT GGTGGTTAGA GCCTCTGTTT CTGATTCCTT CTTCTCAAGA 
    AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17911123 [Map]; Strand: w
      • AT4G38190.1 - [+] show detail - cellulose synthase like D4
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-4066-1 - 3-prime edge 
    NTNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCGTGACCCA CTTGATGCTA CCACTGTCGC AGAGTCTGTT TCTGTAATCT 
    CTTGTTGGTA TGAGGATAAA ACGGAGTGGG GAGATAGAGT TGGATGGATT 
    TATGGGTCGG TGACAGAGGA CGTGGTCACA GGATACCGCA TGCATAATCG 
    TGGGTGGCGC TCGGTTTACT GCATCACTAA GCGAGATTCT TTTCGAGGCT 
    CTGCACCCAT TAATCTCACG GATCGTCTTC ACCAGGTGTT GCGGTGGGCC 
    ACTGGGTCTG TTGAGATC

AT4G38190.1

Model type
Protein coding
Short Description
cellulose synthase like D4
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase like D4 (CSLD4); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3503 Blast hits to 2866 proteins in 674 species: Archae - 22; Bacteria - 1611; Metazoa - 5; Fungi - 10; Plants - 1761; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR