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Mutant Lines
54-3335-1

54-3335-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 557259 [Map]; Strand: w
- AT4G01340.1 - [+] show detail - CHP-rich zinc finger protein-related
  Distance: 298; Region: intergenic
- AT4G01350.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: -3000; Region: intergenic

GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC ACAAACTTGC AAGGAACTAA ACACCATCGA CCTCCTTGTT 
ATTTGAGAGC ATGCATGATC ACTTAAATTT TCTGTTCTTT CAAACATACC 
AATTTTATTG CAAATACTTA AGAAAAACAC TCATGTTTAT CATACACNTT 
GGATGAGTAC TACAATCTCA AAAGCAGAGT AAATATCAAG GGAAGAGGCC 
TTTGAGGTCC TCACAGCTGT CAGCTTGTCG TTCTTCTTGA AACGGATAAG 
ACTTAAAGTT CATAAACACA TCGAATTACA CAAAGAAGAC ACAAAAAGTT 
CCTATATATT GCAAGACAAA CTCTACTTGC ACTCTAGCTC TCGTTGCTTT 
GGCTTTGGCT TTAGCTTTAT TTGCTTCACG TTTAGCCTTG TAAGGTATGA 
TACTGAAGCT

3 prime edge [+] show sequence

Chromosome: 4; Position: 557246 [Map]; Strand: w
- AT4G01340.1 - [+] show detail - CHP-rich zinc finger protein-related
  Distance: 285; Region: intergenic
- AT4G01350.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: -3013; Region: intergenic

ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATTG 
TGTAGTTGAT AAGTCCCAAA AACAACAAGA ACACAAGATC TCTTTAATGG 
TAATTTAAAC TTTTGATTTT TTATACAAGC AAATACAAGA AGTGGAATCG 
TAGAGACTTC TATATATAAT AAAGGGAATT ATCACTTACG TTAGGTTTTT 
CATTGGTTTA ATGATTCGGT TTGATGCTCT TATGCCAGTT TGATCAATCT 
GCATGTGCAC CTGTGACTTC ATCAGTATTG GTGTATAATA TATAACCAGC 
ATTTACCATT AGAAAACAAA AATCACTCTC TGTTACATAT CAGTTCTTGC 
AAATAAAAGA GGAATGACGC TAATGAAATA ATACAACCAT GATAGAACGG 
AACCACTCAT TATCATTAAA TGTAAGTTCA ACTTACTAAC CCAAATAACT 
AGATAAACAT GAACGGGAAC ATATATACCC GATTGTCTTC ATTACGTTCC 
TTTTTAGGAT GACAGAGACC TTGCATCGAG AGTGACACTG GATGCATATA 
TAATGGCCGA GTGTTGTGAT TGTTAGGAAC CACCTCAAAA CTAATTTCTT 
TTCCCCCAAA GGGTAAGAAT T

AT4G01340.1

Model type: Protein coding
Short Description: CHP-rich zinc finger protein-related
Computational Description: CHP-rich zinc finger protein-related; BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 195 Blast hits to 185 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01350.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR