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54-2563-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3543774 [Map]; Strand: c
      • AT3G11310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-2563-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCATG ATGATAATTA CACTGGAGAT GATGATATCA 
    CTATTCCGCG GTATAAAGCA TATTGGTCAT CGTCTTCACA TGAGATTTTT 
    GTGGATTTGT TGTTCACAGA GTCTTTAAAA GAAAACAGAC CTAAGCCAGC 
    CAGACGTAAC GGATACTATG CAAAGGAAAC TTGGAATATG ATGGTTGAGT 
    CGTTCAACCA GAAGACAGGA CTACGCTACA CAAGAAAGCA GCTCAAAAAC 
    CACTGGAATA TTACCAGGGA TGCTTGGAGG CGCTGGTGTC AAGCTGTTGG 
    CTCTCCGCTG TTGAAGTGGG ATACCAACAC CAAAACCTTT GGCGCTACGT 
    CGGAGGACTG GGAAAACTAC TCCAAGGTTA AAAAAACGTA TTCAATGTTT 
    TTATCAATTG GTATAATTTT GCAGCTTGGG AATAACATTG AATATGTTTT 
    CTTTGTTTTG TCTTATAGGA AAATAAGAGA GCTGAACAAT TCAGATTGAA 
    ACATATTCCT CACGCTGATA AACTAGCAAT CATCTTCAAA GGACATGTAG 
    AACCTGGAAA GACCGCTTTG CGTCCTTATC GCAAGAGAGT GAATCATCAT 
    TCCGAAGCAC CACAACACCC AGCTCCTTCA TCAGCACTCA ACATTAACGA 
    GTCTGTCCCA GGAAGTGAAN GTGGAGCTGA TGATGACCAC CACATAGTGA 
    TGGATCATCA CTTCGAATCA CCACATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3543772 [Map]; Strand: c
      • AT3G11310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-2563-1 - 3-prime edge 
    NTTTAGANNN GACAGAGGTA TTTGTATCGA CCGTTANCGA CCGNTTTCAT 
    CGACATCATC TCCAGTGTCA TTATCTTCAT CTCCAGTATC ATTATCTGCA 
    TCAGGAATTC GCTTTCTTTT GCCACATGAT GTACCTTCTT CATCACCTAA 
    GTCAGTACCT TCAAAGATCA TCTTTAGGTC CTTGAGAAAC GGTGGAGGAC 
    TCGACCTAAA CCGATACTGC TTAGCCTTAG GATTCACCTG TGACAAATCC 
    AATCAAGTTT TACTAATTAT ATAGCCTTTA AACAAACAAC CAAAATTAAC 
    ACAACATAAA CCATTCTTTG TACCCTAAAA TAGTTGGTCC AGACTTCAGT 
    ACTCGCACCA AACTTCTTTG TCTGGGGATC CCATTTCATC TCACTGCATT 
    CAACAAGTCT ACACCACGCC CTCCACAGTC TCAACATGGN ATCCCAATGA 
    TTCTTAAGCT GGTCTCTGGT GAACCTAGCG CCAGTTTTTT GTACAAAAGA 
    TTCCCATATA CGGTTCAATC CAGGTAATCG AAATCCCAAC ATCTTTTGCT 
    CAACGCATAA ATCCACAAAT ACTNTGTGTA GTTCAGGTTC CCACATGACT 
    TTCTCTCTCG TCATTGTAAC TCCTTCCTAT ATGTGTAGAT NAGTAAAAAC 
    AACGACAACG NCAACCACTA AACATNTGAG TGCATTGATT CTNACTAATT 
    AATNGCAATA ACTAAATCGT GTAGCAACTT TTCTTGGACA ATAATNAATN 
    TTCACAAACG GTTAAAGGAA CAAAAA

AT3G11310.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR